Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RPL39P62891 AC008627.1-201ENST00000517511 1704 ntBASIC3.95□□□□□ -1.78
RPL39P62891 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
RPL39P62891 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC3.95□□□□□ -1.78
RPL39P62891 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC3.95□□□□□ -1.78
RPL39P62891 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
RPL39P62891 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
RPL39P62891 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
RPL39P62891 AC137056.2-201ENST00000624055 1958 ntBASIC3.94□□□□□ -1.78
RPL39P62891 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC3.94□□□□□ -1.78
RPL39P62891 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC3.94□□□□□ -1.78
RPL39P62891 LINC01613-201ENST00000561476 2780 ntBASIC3.94□□□□□ -1.78
RPL39P62891 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC3.94□□□□□ -1.78
RPL39P62891 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC3.94□□□□□ -1.78
RPL39P62891 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
RPL39P62891 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RPL39P62891 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
RPL39P62891 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RPL39P62891 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
RPL39P62891 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
RPL39P62891 RNA5SP241-201ENST00000391326 114 ntBASIC3.94□□□□□ -1.78
RPL39P62891 AL357752.1-201ENST00000412817 349 ntBASIC3.94□□□□□ -1.78
RPL39P62891 NIFKP3-201ENST00000417799 865 ntBASIC3.94□□□□□ -1.78
RPL39P62891 RPL7P56-201ENST00000429441 717 ntBASIC3.94□□□□□ -1.78
RPL39P62891 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC3.94□□□□□ -1.78
RPL39P62891 NANOGP9-201ENST00000439890 892 ntBASIC3.94□□□□□ -1.78
RPL39P62891 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC3.94□□□□□ -1.78
RPL39P62891 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC3.94□□□□□ -1.78
RPL39P62891 WDR82P2-201ENST00000444540 928 ntBASIC3.94□□□□□ -1.78
RPL39P62891 IGBP1P3-201ENST00000447449 1000 ntBASIC3.94□□□□□ -1.78
RPL39P62891 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC3.94□□□□□ -1.78
RPL39P62891 AL445991.1-201ENST00000450381 475 ntBASIC3.94□□□□□ -1.78
RPL39P62891 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RPL39P62891 AC093166.4-201ENST00000457867 318 ntBASIC3.94□□□□□ -1.78
RPL39P62891 RN7SL188P-201ENST00000469842 285 ntBASIC3.94□□□□□ -1.78
RPL39P62891 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC3.94□□□□□ -1.78
RPL39P62891 AC114324.2-202ENST00000503812 134 ntBASIC3.94□□□□□ -1.78
RPL39P62891 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC3.94□□□□□ -1.78
RPL39P62891 HMGN1P17-201ENST00000513734 295 ntBASIC3.94□□□□□ -1.78
RPL39P62891 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC3.94□□□□□ -1.78
RPL39P62891 PMS2P3-207ENST00000529061 717 ntBASIC3.94□□□□□ -1.78
RPL39P62891 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC3.94□□□□□ -1.78
RPL39P62891 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC3.94□□□□□ -1.78
RPL39P62891 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC3.94□□□□□ -1.78
RPL39P62891 NMNAT1P5-201ENST00000559657 841 ntBASIC3.94□□□□□ -1.78
RPL39P62891 AL078624.2-201ENST00000605063 554 ntBASIC3.94□□□□□ -1.78
RPL39P62891 FAM72A-208ENST00000607379 1139 ntBASIC3.94□□□□□ -1.78
RPL39P62891 AC005899.7-201ENST00000618199 588 ntBASIC3.94□□□□□ -1.78
RPL39P62891 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC3.94□□□□□ -1.78
RPL39P62891 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
RPL39P62891 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
RPL39P62891 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC3.94□□□□□ -1.78
RPL39P62891 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RPL39P62891 CAP1P2-201ENST00000417455 1409 ntBASIC3.94□□□□□ -1.78
RPL39P62891 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC3.94□□□□□ -1.78
RPL39P62891 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RPL39P62891 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RPL39P62891 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RPL39P62891 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
RPL39P62891 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC3.94□□□□□ -1.78
RPL39P62891 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
RPL39P62891 AC027088.4-201ENST00000611559 1947 ntBASIC3.93□□□□□ -1.78
RPL39P62891 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RPL39P62891 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RPL39P62891 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
RPL39P62891 PWAR1-201ENST00000624188 2414 ntBASIC3.93□□□□□ -1.78
RPL39P62891 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RPL39P62891 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC3.93□□□□□ -1.78
RPL39P62891 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC3.93□□□□□ -1.78
RPL39P62891 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC3.93□□□□□ -1.78
RPL39P62891 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC3.93□□□□□ -1.78
RPL39P62891 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
RPL39P62891 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RPL39P62891 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC3.93□□□□□ -1.78
RPL39P62891 SNORD56.6-201ENST00000384569 71 ntBASIC3.93□□□□□ -1.78
RPL39P62891 MIR188-201ENST00000385034 86 ntBASIC3.93□□□□□ -1.78
RPL39P62891 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RPL39P62891 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RPL39P62891 AC016739.1-201ENST00000405359 345 ntBASIC3.93□□□□□ -1.78
RPL39P62891 RNA5SP431-201ENST00000410312 120 ntBASIC3.93□□□□□ -1.78
RPL39P62891 RN7SKP29-201ENST00000410957 272 ntBASIC3.93□□□□□ -1.78
RPL39P62891 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC3.93□□□□□ -1.78
RPL39P62891 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC3.93□□□□□ -1.78
RPL39P62891 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC3.93□□□□□ -1.78
RPL39P62891 RNF10P1-201ENST00000418589 369 ntBASIC3.93□□□□□ -1.78
RPL39P62891 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC3.93□□□□□ -1.78
RPL39P62891 GAPDHP19-201ENST00000431768 1005 ntBASIC3.93□□□□□ -1.78
RPL39P62891 PSMD8P1-201ENST00000436275 769 ntBASIC3.93□□□□□ -1.78
RPL39P62891 AL590399.4-201ENST00000436561 601 ntBASIC3.93□□□□□ -1.78
RPL39P62891 AL353662.1-201ENST00000439099 327 ntBASIC3.93□□□□□ -1.78
RPL39P62891 EIF5AP4-201ENST00000441206 465 ntBASIC3.93□□□□□ -1.78
RPL39P62891 AC092106.1-201ENST00000444291 373 ntBASIC3.93□□□□□ -1.78
RPL39P62891 AC010240.2-201ENST00000445363 1205 ntBASIC3.93□□□□□ -1.78
RPL39P62891 OR52E3P-201ENST00000452083 936 ntBASIC3.93□□□□□ -1.78
RPL39P62891 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC3.93□□□□□ -1.78
RPL39P62891 RPL12P24-201ENST00000474907 486 ntBASIC3.93□□□□□ -1.78
RPL39P62891 AC092865.4-201ENST00000477936 615 ntBASIC3.93□□□□□ -1.78
RPL39P62891 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC3.93□□□□□ -1.78
RPL39P62891 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC3.93□□□□□ -1.78
RPL39P62891 RNA5SP75-201ENST00000516841 111 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms