Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 SNORA21-201ENST00000362423 132 ntBASIC6.42□□□□□ -1.38
VCPP55072 RNU1-150P-201ENST00000362491 162 ntBASIC6.42□□□□□ -1.38
VCPP55072 SNORA43.1-201ENST00000364863 140 ntBASIC6.42□□□□□ -1.38
VCPP55072 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.42□□□□□ -1.38
VCPP55072 AL132875.1-201ENST00000403623 949 ntBASIC6.42□□□□□ -1.38
VCPP55072 AC092017.2-201ENST00000427600 362 ntBASIC6.42□□□□□ -1.38
VCPP55072 PPIAP10-201ENST00000438675 458 ntBASIC6.42□□□□□ -1.38
VCPP55072 AL512637.1-201ENST00000439523 1231 ntBASIC6.42□□□□□ -1.38
VCPP55072 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
VCPP55072 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.42□□□□□ -1.38
VCPP55072 SCARNA18.1-201ENST00000516330 83 ntBASIC6.42□□□□□ -1.38
VCPP55072 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.42□□□□□ -1.38
VCPP55072 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.42□□□□□ -1.38
VCPP55072 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.42□□□□□ -1.38
VCPP55072 AC104695.2-201ENST00000605056 775 ntBASIC6.42□□□□□ -1.38
VCPP55072 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.42□□□□□ -1.38
VCPP55072 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.42□□□□□ -1.38
VCPP55072 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.42□□□□□ -1.38
VCPP55072 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.42□□□□□ -1.38
VCPP55072 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VCPP55072 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VCPP55072 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.42□□□□□ -1.38
VCPP55072 AC235565.1-201ENST00000456962 1325 ntBASIC6.42□□□□□ -1.38
VCPP55072 SAMMSON-210ENST00000641260 1308 ntBASIC6.42□□□□□ -1.38
VCPP55072 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VCPP55072 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
VCPP55072 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
VCPP55072 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
VCPP55072 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
VCPP55072 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
VCPP55072 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.41□□□□□ -1.38
VCPP55072 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
VCPP55072 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.41□□□□□ -1.38
VCPP55072 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.41□□□□□ -1.38
VCPP55072 AL731532.1-201ENST00000623972 4236 ntBASIC6.41□□□□□ -1.38
VCPP55072 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.41□□□□□ -1.38
VCPP55072 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
VCPP55072 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
VCPP55072 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
VCPP55072 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
VCPP55072 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
VCPP55072 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
VCPP55072 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
VCPP55072 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.41□□□□□ -1.38
VCPP55072 OR3D1P-201ENST00000438288 955 ntBASIC6.41□□□□□ -1.38
VCPP55072 AC005077.1-201ENST00000449226 375 ntBASIC6.41□□□□□ -1.38
VCPP55072 FTH1P2-201ENST00000466086 412 ntBASIC6.41□□□□□ -1.38
VCPP55072 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC6.41□□□□□ -1.38
VCPP55072 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC6.41□□□□□ -1.38
VCPP55072 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.41□□□□□ -1.38
VCPP55072 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.41□□□□□ -1.38
VCPP55072 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.41□□□□□ -1.38
VCPP55072 AC021269.1-201ENST00000526860 705 ntBASIC6.41□□□□□ -1.38
VCPP55072 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
VCPP55072 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.41□□□□□ -1.38
VCPP55072 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.41□□□□□ -1.38
VCPP55072 AP005119.1-201ENST00000580956 292 ntBASIC6.41□□□□□ -1.38
VCPP55072 MIR4420-201ENST00000583944 77 ntBASIC6.41□□□□□ -1.38
VCPP55072 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.41□□□□□ -1.38
VCPP55072 AC004890.3-201ENST00000605566 1095 ntBASIC6.41□□□□□ -1.38
VCPP55072 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.41□□□□□ -1.38
VCPP55072 AC079395.2-201ENST00000610982 737 ntBASIC6.41□□□□□ -1.38
VCPP55072 MIR6793-201ENST00000612376 63 ntBASIC6.41□□□□□ -1.38
VCPP55072 AC037198.3-201ENST00000616754 526 ntBASIC6.41□□□□□ -1.38
VCPP55072 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.41□□□□□ -1.38
VCPP55072 CASC19-222ENST00000641321 1173 ntBASIC6.41□□□□□ -1.38
VCPP55072 OR7A1P-202ENST00000641542 1158 ntBASIC6.41□□□□□ -1.38
VCPP55072 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
VCPP55072 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.41□□□□□ -1.38
VCPP55072 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.41□□□□□ -1.38
VCPP55072 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.41□□□□□ -1.38
VCPP55072 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
VCPP55072 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
VCPP55072 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
VCPP55072 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.41□□□□□ -1.38
VCPP55072 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.41□□□□□ -1.38
VCPP55072 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.41□□□□□ -1.38
VCPP55072 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
VCPP55072 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
VCPP55072 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
VCPP55072 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
VCPP55072 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.4□□□□□ -1.38
VCPP55072 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.4□□□□□ -1.38
VCPP55072 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
VCPP55072 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
VCPP55072 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
VCPP55072 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
VCPP55072 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
VCPP55072 AL359091.1-201ENST00000449048 1734 ntBASIC6.4□□□□□ -1.38
VCPP55072 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.4□□□□□ -1.38
VCPP55072 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
VCPP55072 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
VCPP55072 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
VCPP55072 AL354890.1-201ENST00000413730 346 ntBASIC6.4□□□□□ -1.38
VCPP55072 NPM1P4-201ENST00000414095 812 ntBASIC6.4□□□□□ -1.38
VCPP55072 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.4□□□□□ -1.38
VCPP55072 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
VCPP55072 AC245884.2-201ENST00000426257 404 ntBASIC6.4□□□□□ -1.38
VCPP55072 BX679664.2-201ENST00000439282 283 ntBASIC6.4□□□□□ -1.38
VCPP55072 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms