Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NR1H2P55055 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NR1H2P55055 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NR1H2P55055 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NR1H2P55055 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.94□□□□□ -1.46
NR1H2P55055 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NR1H2P55055 AC097461.1-201ENST00000568928 2821 ntBASIC5.93□□□□□ -1.46
NR1H2P55055 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.93□□□□□ -1.46
NR1H2P55055 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
NR1H2P55055 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.93□□□□□ -1.46
NR1H2P55055 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
NR1H2P55055 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NR1H2P55055 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
NR1H2P55055 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
NR1H2P55055 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NR1H2P55055 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NR1H2P55055 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
NR1H2P55055 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
NR1H2P55055 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NR1H2P55055 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
NR1H2P55055 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NR1H2P55055 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NR1H2P55055 RNA5SP232-201ENST00000364144 119 ntBASIC5.93□□□□□ -1.46
NR1H2P55055 RGS5-202ENST00000367903 934 ntTSL 3 BASIC5.93□□□□□ -1.46
NR1H2P55055 OR6K3-202ENST00000368146 996 ntBASIC5.93□□□□□ -1.46
NR1H2P55055 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC5.93□□□□□ -1.46
NR1H2P55055 Z86062.1-201ENST00000406773 777 ntBASIC5.93□□□□□ -1.46
NR1H2P55055 AL139184.1-202ENST00000422303 222 ntBASIC5.93□□□□□ -1.46
NR1H2P55055 AL390879.2-203ENST00000426943 1121 ntBASIC5.93□□□□□ -1.46
NR1H2P55055 RPL17P35-201ENST00000432217 549 ntBASIC5.93□□□□□ -1.46
NR1H2P55055 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.93□□□□□ -1.46
NR1H2P55055 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.93□□□□□ -1.46
NR1H2P55055 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NR1H2P55055 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.93□□□□□ -1.46
NR1H2P55055 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NR1H2P55055 MEF2AP1-201ENST00000454867 863 ntBASIC5.93□□□□□ -1.46
NR1H2P55055 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.93□□□□□ -1.46
NR1H2P55055 RPS7P10-201ENST00000464254 603 ntBASIC5.93□□□□□ -1.46
NR1H2P55055 AC104339.1-201ENST00000465478 348 ntBASIC5.93□□□□□ -1.46
NR1H2P55055 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.93□□□□□ -1.46
NR1H2P55055 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NR1H2P55055 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.93□□□□□ -1.46
NR1H2P55055 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.93□□□□□ -1.46
NR1H2P55055 AC108120.2-201ENST00000512973 294 ntBASIC5.93□□□□□ -1.46
NR1H2P55055 IGHV3-63-201ENST00000518422 341 ntBASIC5.93□□□□□ -1.46
NR1H2P55055 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC5.93□□□□□ -1.46
NR1H2P55055 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.93□□□□□ -1.46
NR1H2P55055 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.93□□□□□ -1.46
NR1H2P55055 MTND1P36-201ENST00000522384 936 ntBASIC5.93□□□□□ -1.46
NR1H2P55055 AC021269.1-201ENST00000526860 705 ntBASIC5.93□□□□□ -1.46
NR1H2P55055 OR9G2P-201ENST00000533326 880 ntBASIC5.93□□□□□ -1.46
NR1H2P55055 GNG2-203ENST00000553432 577 ntTSL 4 BASIC5.93□□□□□ -1.46
NR1H2P55055 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.93□□□□□ -1.46
NR1H2P55055 AC122134.1-201ENST00000565664 1104 ntBASIC5.93□□□□□ -1.46
NR1H2P55055 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.93□□□□□ -1.46
NR1H2P55055 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC5.93□□□□□ -1.46
NR1H2P55055 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.93□□□□□ -1.46
NR1H2P55055 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC5.93□□□□□ -1.46
NR1H2P55055 MTCO3P22-201ENST00000603219 784 ntBASIC5.93□□□□□ -1.46
NR1H2P55055 AL671309.1-201ENST00000603750 544 ntBASIC5.93□□□□□ -1.46
NR1H2P55055 HNRNPA3P9-201ENST00000604913 979 ntBASIC5.93□□□□□ -1.46
NR1H2P55055 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.93□□□□□ -1.46
NR1H2P55055 AL021368.3-201ENST00000607119 578 ntBASIC5.93□□□□□ -1.46
NR1H2P55055 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.93□□□□□ -1.46
NR1H2P55055 MIR7109-201ENST00000613748 65 ntBASIC5.93□□□□□ -1.46
NR1H2P55055 AC116667.2-201ENST00000641075 823 ntBASIC5.93□□□□□ -1.46
NR1H2P55055 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NR1H2P55055 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NR1H2P55055 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.93□□□□□ -1.46
NR1H2P55055 ADAM24P-201ENST00000398655 2101 ntBASIC5.93□□□□□ -1.46
NR1H2P55055 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NR1H2P55055 VPS35P1-201ENST00000563400 1518 ntBASIC5.93□□□□□ -1.46
NR1H2P55055 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
NR1H2P55055 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
NR1H2P55055 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC5.93□□□□□ -1.46
NR1H2P55055 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NR1H2P55055 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
NR1H2P55055 AL512329.1-201ENST00000404600 1592 ntBASIC5.93□□□□□ -1.46
NR1H2P55055 AC010132.4-201ENST00000569883 1368 ntBASIC5.93□□□□□ -1.46
NR1H2P55055 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.93□□□□□ -1.46
NR1H2P55055 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC5.92□□□□□ -1.46
NR1H2P55055 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NR1H2P55055 AC138907.8-201ENST00000623981 2256 ntBASIC5.92□□□□□ -1.46
NR1H2P55055 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NR1H2P55055 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NR1H2P55055 RNA5SP308-201ENST00000362532 115 ntBASIC5.92□□□□□ -1.46
NR1H2P55055 RNU1-55P-201ENST00000365510 158 ntBASIC5.92□□□□□ -1.46
NR1H2P55055 RNA5SP474-201ENST00000391234 90 ntBASIC5.92□□□□□ -1.46
NR1H2P55055 AL133260.1-201ENST00000405720 405 ntBASIC5.92□□□□□ -1.46
NR1H2P55055 THEM7P-201ENST00000419556 672 ntBASIC5.92□□□□□ -1.46
NR1H2P55055 OR6K4P-201ENST00000423179 955 ntBASIC5.92□□□□□ -1.46
NR1H2P55055 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.92□□□□□ -1.46
NR1H2P55055 RPL23AP4-201ENST00000427757 463 ntBASIC5.92□□□□□ -1.46
NR1H2P55055 FTLP19-201ENST00000433300 394 ntBASIC5.92□□□□□ -1.46
NR1H2P55055 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
NR1H2P55055 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC5.92□□□□□ -1.46
NR1H2P55055 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC5.92□□□□□ -1.46
NR1H2P55055 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.92□□□□□ -1.46
NR1H2P55055 AL121578.2-201ENST00000448797 447 ntBASIC5.92□□□□□ -1.46
NR1H2P55055 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms