Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HMGCS2P54868 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HMGCS2P54868 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.63□□□□□ -1.35
HMGCS2P54868 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.63□□□□□ -1.35
HMGCS2P54868 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
HMGCS2P54868 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
HMGCS2P54868 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.63□□□□□ -1.35
HMGCS2P54868 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.63□□□□□ -1.35
HMGCS2P54868 VDAC2P4-201ENST00000452925 711 ntBASIC6.63□□□□□ -1.35
HMGCS2P54868 RN7SL172P-201ENST00000460535 303 ntBASIC6.63□□□□□ -1.35
HMGCS2P54868 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HMGCS2P54868 RN7SL826P-201ENST00000479724 288 ntBASIC6.63□□□□□ -1.35
HMGCS2P54868 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HMGCS2P54868 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.63□□□□□ -1.35
HMGCS2P54868 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HMGCS2P54868 AC074255.1-201ENST00000511259 501 ntBASIC6.63□□□□□ -1.35
HMGCS2P54868 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
HMGCS2P54868 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.63□□□□□ -1.35
HMGCS2P54868 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.63□□□□□ -1.35
HMGCS2P54868 AC090607.5-201ENST00000615692 224 ntBASIC6.63□□□□□ -1.35
HMGCS2P54868 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
HMGCS2P54868 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.63□□□□□ -1.35
HMGCS2P54868 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
HMGCS2P54868 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
HMGCS2P54868 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HMGCS2P54868 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HMGCS2P54868 AC007342.5-201ENST00000571340 2142 ntBASIC6.62□□□□□ -1.35
HMGCS2P54868 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HMGCS2P54868 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
HMGCS2P54868 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HMGCS2P54868 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HMGCS2P54868 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.62□□□□□ -1.35
HMGCS2P54868 MIR223-201ENST00000385204 110 ntBASIC6.62□□□□□ -1.35
HMGCS2P54868 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
HMGCS2P54868 RNU1-77P-201ENST00000390868 162 ntBASIC6.62□□□□□ -1.35
HMGCS2P54868 AC005042.1-201ENST00000393397 800 ntBASIC6.62□□□□□ -1.35
HMGCS2P54868 AC116036.1-201ENST00000412199 367 ntBASIC6.62□□□□□ -1.35
HMGCS2P54868 HMGA1P8-201ENST00000414130 321 ntBASIC6.62□□□□□ -1.35
HMGCS2P54868 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.62□□□□□ -1.35
HMGCS2P54868 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.62□□□□□ -1.35
HMGCS2P54868 RPL7P39-201ENST00000481157 744 ntBASIC6.62□□□□□ -1.35
HMGCS2P54868 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.62□□□□□ -1.35
HMGCS2P54868 ASB8-215ENST00000540782 659 ntTSL 3 BASIC6.62□□□□□ -1.35
HMGCS2P54868 HAUS8P1-201ENST00000549005 542 ntBASIC6.62□□□□□ -1.35
HMGCS2P54868 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.62□□□□□ -1.35
HMGCS2P54868 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.62□□□□□ -1.35
HMGCS2P54868 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.62□□□□□ -1.35
HMGCS2P54868 AL355974.3-201ENST00000617383 467 ntBASIC6.62□□□□□ -1.35
HMGCS2P54868 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
HMGCS2P54868 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC6.62□□□□□ -1.35
HMGCS2P54868 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC6.62□□□□□ -1.35
HMGCS2P54868 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HMGCS2P54868 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
HMGCS2P54868 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.62□□□□□ -1.35
HMGCS2P54868 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HMGCS2P54868 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.62□□□□□ -1.35
HMGCS2P54868 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.62□□□□□ -1.35
HMGCS2P54868 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.62□□□□□ -1.35
HMGCS2P54868 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HMGCS2P54868 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC6.61□□□□□ -1.35
HMGCS2P54868 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HMGCS2P54868 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
HMGCS2P54868 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
HMGCS2P54868 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC6.61□□□□□ -1.35
HMGCS2P54868 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HMGCS2P54868 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.61□□□□□ -1.35
HMGCS2P54868 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.61□□□□□ -1.35
HMGCS2P54868 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.61□□□□□ -1.35
HMGCS2P54868 RNU4-2-201ENST00000365668 141 ntBASIC6.61□□□□□ -1.35
HMGCS2P54868 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.61□□□□□ -1.35
HMGCS2P54868 RPS6P23-201ENST00000413224 722 ntBASIC6.61□□□□□ -1.35
HMGCS2P54868 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC6.61□□□□□ -1.35
HMGCS2P54868 RPS17P17-201ENST00000419392 409 ntBASIC6.61□□□□□ -1.35
HMGCS2P54868 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HMGCS2P54868 AC006455.6-201ENST00000426192 893 ntBASIC6.61□□□□□ -1.35
HMGCS2P54868 CYCSP6-201ENST00000434498 302 ntBASIC6.61□□□□□ -1.35
HMGCS2P54868 AC006335.2-201ENST00000437993 330 ntBASIC6.61□□□□□ -1.35
HMGCS2P54868 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.61□□□□□ -1.35
HMGCS2P54868 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.61□□□□□ -1.35
HMGCS2P54868 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6.61□□□□□ -1.35
HMGCS2P54868 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.61□□□□□ -1.35
HMGCS2P54868 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.61□□□□□ -1.35
HMGCS2P54868 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.61□□□□□ -1.35
HMGCS2P54868 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC6.61□□□□□ -1.35
HMGCS2P54868 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.61□□□□□ -1.35
HMGCS2P54868 CASC19-222ENST00000641321 1173 ntBASIC6.61□□□□□ -1.35
HMGCS2P54868 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HMGCS2P54868 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.61□□□□□ -1.35
HMGCS2P54868 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HMGCS2P54868 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC6.61□□□□□ -1.35
HMGCS2P54868 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HMGCS2P54868 AC023632.6-201ENST00000624338 2177 ntBASIC6.61□□□□□ -1.35
HMGCS2P54868 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.61□□□□□ -1.35
HMGCS2P54868 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.61□□□□□ -1.35
HMGCS2P54868 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HMGCS2P54868 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
HMGCS2P54868 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
HMGCS2P54868 AL031651.1-201ENST00000615357 1438 ntBASIC6.6□□□□□ -1.35
HMGCS2P54868 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.6□□□□□ -1.35
HMGCS2P54868 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms