Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC011504.1-201ENST00000623331 4103 ntBASIC6.41□□□□□ -1.38
CLCN3P51790 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CLCN3P51790 AP004289.1-201ENST00000436307 2205 ntBASIC6.41□□□□□ -1.38
CLCN3P51790 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CLCN3P51790 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
CLCN3P51790 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
CLCN3P51790 OR5AQ1P-202ENST00000641257 1534 ntBASIC6.4□□□□□ -1.38
CLCN3P51790 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CLCN3P51790 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
CLCN3P51790 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
CLCN3P51790 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
CLCN3P51790 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
CLCN3P51790 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.4□□□□□ -1.38
CLCN3P51790 GTF2IP4-201ENST00000453092 2054 ntBASIC6.4□□□□□ -1.38
CLCN3P51790 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CLCN3P51790 SRRM1P3-201ENST00000426911 2678 ntBASIC6.4□□□□□ -1.38
CLCN3P51790 AL159987.1-201ENST00000347911 293 ntBASIC6.4□□□□□ -1.38
CLCN3P51790 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.4□□□□□ -1.38
CLCN3P51790 NPM1P36-201ENST00000415681 835 ntBASIC6.4□□□□□ -1.38
CLCN3P51790 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.4□□□□□ -1.38
CLCN3P51790 HMGB1P32-201ENST00000425971 565 ntBASIC6.4□□□□□ -1.38
CLCN3P51790 AL022331.1-201ENST00000429025 477 ntBASIC6.4□□□□□ -1.38
CLCN3P51790 AL121776.1-201ENST00000429337 372 ntBASIC6.4□□□□□ -1.38
CLCN3P51790 AK3P5-201ENST00000432033 519 ntBASIC6.4□□□□□ -1.38
CLCN3P51790 Z84478.1-201ENST00000438230 1219 ntBASIC6.4□□□□□ -1.38
CLCN3P51790 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.4□□□□□ -1.38
CLCN3P51790 AC073909.1-201ENST00000447112 999 ntBASIC6.4□□□□□ -1.38
CLCN3P51790 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.4□□□□□ -1.38
CLCN3P51790 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.4□□□□□ -1.38
CLCN3P51790 AC004129.2-201ENST00000457229 287 ntBASIC6.4□□□□□ -1.38
CLCN3P51790 RN7SL72P-201ENST00000460697 269 ntBASIC6.4□□□□□ -1.38
CLCN3P51790 AP002371.1-201ENST00000463604 433 ntBASIC6.4□□□□□ -1.38
CLCN3P51790 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.4□□□□□ -1.38
CLCN3P51790 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.4□□□□□ -1.38
CLCN3P51790 SNORD116-30-201ENST00000516468 85 ntBASIC6.4□□□□□ -1.38
CLCN3P51790 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.4□□□□□ -1.38
CLCN3P51790 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6.4□□□□□ -1.38
CLCN3P51790 FO393422.1-201ENST00000603908 708 ntBASIC6.4□□□□□ -1.38
CLCN3P51790 AC022467.1-201ENST00000614738 749 ntBASIC6.4□□□□□ -1.38
CLCN3P51790 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CLCN3P51790 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.4□□□□□ -1.39
CLCN3P51790 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.39
CLCN3P51790 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.39
CLCN3P51790 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.39
CLCN3P51790 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.4□□□□□ -1.39
CLCN3P51790 AP004607.3-201ENST00000530354 3915 ntBASIC6.4□□□□□ -1.39
CLCN3P51790 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
CLCN3P51790 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.4□□□□□ -1.39
CLCN3P51790 OR5AQ1P-203ENST00000641818 1529 ntBASIC6.4□□□□□ -1.39
CLCN3P51790 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
CLCN3P51790 MAPK10-270ENST00000641102 3538 ntBASIC6.39□□□□□ -1.39
CLCN3P51790 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CLCN3P51790 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.39□□□□□ -1.39
CLCN3P51790 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.39□□□□□ -1.39
CLCN3P51790 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CLCN3P51790 AL669831.5-218ENST00000591702 1873 ntBASIC6.39□□□□□ -1.39
CLCN3P51790 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
CLCN3P51790 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CLCN3P51790 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
CLCN3P51790 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CLCN3P51790 SNORA70H-201ENST00000383910 135 ntBASIC6.39□□□□□ -1.39
CLCN3P51790 SNORA70J-201ENST00000384182 135 ntBASIC6.39□□□□□ -1.39
CLCN3P51790 AL596448.1-201ENST00000415024 392 ntBASIC6.39□□□□□ -1.39
CLCN3P51790 BMS1P17-202ENST00000416720 316 ntBASIC6.39□□□□□ -1.39
CLCN3P51790 NME1P1-201ENST00000420914 382 ntBASIC6.39□□□□□ -1.39
CLCN3P51790 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.39□□□□□ -1.39
CLCN3P51790 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC6.39□□□□□ -1.39
CLCN3P51790 FRG2FP-204ENST00000453982 852 ntBASIC6.39□□□□□ -1.39
CLCN3P51790 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.39□□□□□ -1.39
CLCN3P51790 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CLCN3P51790 AL445687.2-201ENST00000458156 728 ntBASIC6.39□□□□□ -1.39
CLCN3P51790 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
CLCN3P51790 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC6.39□□□□□ -1.39
CLCN3P51790 OR51A1P-201ENST00000511110 946 ntBASIC6.39□□□□□ -1.39
CLCN3P51790 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.39□□□□□ -1.39
CLCN3P51790 AC026616.1-201ENST00000523157 525 ntBASIC6.39□□□□□ -1.39
CLCN3P51790 MRPS16P1-201ENST00000523462 412 ntBASIC6.39□□□□□ -1.39
CLCN3P51790 IGHVIII-67-4-201ENST00000524281 296 ntBASIC6.39□□□□□ -1.39
CLCN3P51790 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.39□□□□□ -1.39
CLCN3P51790 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.39□□□□□ -1.39
CLCN3P51790 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.39□□□□□ -1.39
CLCN3P51790 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.39□□□□□ -1.39
CLCN3P51790 AL589674.2-201ENST00000604304 337 ntBASIC6.39□□□□□ -1.39
CLCN3P51790 AL713998.2-201ENST00000604538 1198 ntBASIC6.39□□□□□ -1.39
CLCN3P51790 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CLCN3P51790 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.39□□□□□ -1.39
CLCN3P51790 AL355974.3-201ENST00000617383 467 ntBASIC6.39□□□□□ -1.39
CLCN3P51790 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.39□□□□□ -1.39
CLCN3P51790 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.39□□□□□ -1.39
CLCN3P51790 FBXL21-201ENST00000297158 1305 ntBASIC6.39□□□□□ -1.39
CLCN3P51790 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CLCN3P51790 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CLCN3P51790 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.39□□□□□ -1.39
CLCN3P51790 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
CLCN3P51790 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.39□□□□□ -1.39
CLCN3P51790 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CLCN3P51790 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CLCN3P51790 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CLCN3P51790 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CLCN3P51790 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms