Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.79□□□□□ -1.48
CXCL12P48061 AC007494.1-201ENST00000562293 760 ntBASIC5.79□□□□□ -1.48
CXCL12P48061 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.79□□□□□ -1.48
CXCL12P48061 AP002884.5-201ENST00000595053 1132 ntBASIC5.79□□□□□ -1.48
CXCL12P48061 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.79□□□□□ -1.48
CXCL12P48061 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
CXCL12P48061 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.79□□□□□ -1.48
CXCL12P48061 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CXCL12P48061 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
CXCL12P48061 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CXCL12P48061 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CXCL12P48061 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CXCL12P48061 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CXCL12P48061 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.79□□□□□ -1.48
CXCL12P48061 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.79□□□□□ -1.48
CXCL12P48061 AC119674.1-213ENST00000641177 1386 ntBASIC5.79□□□□□ -1.48
CXCL12P48061 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC5.79□□□□□ -1.48
CXCL12P48061 AC007938.2-201ENST00000604666 2634 ntBASIC5.78□□□□□ -1.48
CXCL12P48061 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CXCL12P48061 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CXCL12P48061 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CXCL12P48061 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CXCL12P48061 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
CXCL12P48061 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CXCL12P48061 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CXCL12P48061 RNA5SP183-201ENST00000362452 119 ntBASIC5.78□□□□□ -1.48
CXCL12P48061 RN7SKP28-201ENST00000364770 305 ntBASIC5.78□□□□□ -1.48
CXCL12P48061 MIR765-201ENST00000390226 114 ntBASIC5.78□□□□□ -1.48
CXCL12P48061 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CXCL12P48061 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CXCL12P48061 AL121835.1-201ENST00000404250 354 ntBASIC5.78□□□□□ -1.48
CXCL12P48061 RN7SKP279-201ENST00000411383 298 ntBASIC5.78□□□□□ -1.48
CXCL12P48061 RBMY2KP-201ENST00000418221 992 ntBASIC5.78□□□□□ -1.48
CXCL12P48061 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.78□□□□□ -1.48
CXCL12P48061 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.78□□□□□ -1.48
CXCL12P48061 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.78□□□□□ -1.48
CXCL12P48061 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.78□□□□□ -1.48
CXCL12P48061 CYCSP6-201ENST00000434498 302 ntBASIC5.78□□□□□ -1.48
CXCL12P48061 RN7SL97P-201ENST00000486780 299 ntBASIC5.78□□□□□ -1.48
CXCL12P48061 AC074255.1-201ENST00000511259 501 ntBASIC5.78□□□□□ -1.48
CXCL12P48061 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.78□□□□□ -1.48
CXCL12P48061 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.78□□□□□ -1.48
CXCL12P48061 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC5.78□□□□□ -1.48
CXCL12P48061 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC5.78□□□□□ -1.48
CXCL12P48061 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.78□□□□□ -1.48
CXCL12P48061 HIGD1AP5-201ENST00000529959 259 ntBASIC5.78□□□□□ -1.48
CXCL12P48061 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.78□□□□□ -1.48
CXCL12P48061 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.78□□□□□ -1.48
CXCL12P48061 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC5.78□□□□□ -1.48
CXCL12P48061 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.78□□□□□ -1.48
CXCL12P48061 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.78□□□□□ -1.48
CXCL12P48061 TCL6_3.1-201ENST00000619064 137 ntBASIC5.78□□□□□ -1.48
CXCL12P48061 AC073342.3-201ENST00000624211 193 ntBASIC5.78□□□□□ -1.48
CXCL12P48061 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.78□□□□□ -1.48
CXCL12P48061 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CXCL12P48061 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CXCL12P48061 OFD1P17-201ENST00000437639 3018 ntBASIC5.78□□□□□ -1.48
CXCL12P48061 APP-206ENST00000359726 3294 ntTSL 2 BASIC5.78□□□□□ -1.48
CXCL12P48061 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CXCL12P48061 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.78□□□□□ -1.48
CXCL12P48061 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CXCL12P48061 AL589993.1-201ENST00000407450 2524 ntBASIC5.78□□□□□ -1.48
CXCL12P48061 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CXCL12P48061 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CXCL12P48061 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CXCL12P48061 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.48
CXCL12P48061 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
CXCL12P48061 AC131971.1-201ENST00000332881 1482 ntBASIC5.77□□□□□ -1.49
CXCL12P48061 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
CXCL12P48061 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CXCL12P48061 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.77□□□□□ -1.49
CXCL12P48061 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.77□□□□□ -1.49
CXCL12P48061 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CXCL12P48061 IMMTP1-201ENST00000435590 2219 ntBASIC5.77□□□□□ -1.49
CXCL12P48061 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC5.77□□□□□ -1.49
CXCL12P48061 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CXCL12P48061 AC005294.1-201ENST00000355509 281 ntBASIC5.77□□□□□ -1.49
CXCL12P48061 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.77□□□□□ -1.49
CXCL12P48061 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.77□□□□□ -1.49
CXCL12P48061 AL139128.1-201ENST00000413921 941 ntBASIC5.77□□□□□ -1.49
CXCL12P48061 METTL15P3-201ENST00000415522 1221 ntBASIC5.77□□□□□ -1.49
CXCL12P48061 AC019185.1-201ENST00000442718 389 ntBASIC5.77□□□□□ -1.49
CXCL12P48061 AP000547.1-201ENST00000454360 617 ntBASIC5.77□□□□□ -1.49
CXCL12P48061 RNU1-88P-201ENST00000459274 128 ntBASIC5.77□□□□□ -1.49
CXCL12P48061 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC5.77□□□□□ -1.49
CXCL12P48061 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.77□□□□□ -1.49
CXCL12P48061 AC022832.1-201ENST00000530718 645 ntBASIC5.77□□□□□ -1.49
CXCL12P48061 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.77□□□□□ -1.49
CXCL12P48061 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.77□□□□□ -1.49
CXCL12P48061 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5.77□□□□□ -1.49
CXCL12P48061 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.77□□□□□ -1.49
CXCL12P48061 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.77□□□□□ -1.49
CXCL12P48061 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.77□□□□□ -1.49
CXCL12P48061 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC5.77□□□□□ -1.49
CXCL12P48061 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CXCL12P48061 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CXCL12P48061 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CXCL12P48061 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CXCL12P48061 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CXCL12P48061 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 561.7 ms