Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.45□□□□□ -1.54
RFC3P40938 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.45□□□□□ -1.54
RFC3P40938 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.45□□□□□ -1.54
RFC3P40938 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
RFC3P40938 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.45□□□□□ -1.54
RFC3P40938 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.45□□□□□ -1.54
RFC3P40938 AC006530.1-201ENST00000555980 571 ntBASIC5.45□□□□□ -1.54
RFC3P40938 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.45□□□□□ -1.54
RFC3P40938 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.45□□□□□ -1.54
RFC3P40938 AP001267.4-201ENST00000602598 545 ntBASIC5.45□□□□□ -1.54
RFC3P40938 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.45□□□□□ -1.54
RFC3P40938 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.45□□□□□ -1.54
RFC3P40938 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.45□□□□□ -1.54
RFC3P40938 MIR4302-201ENST00000638058 60 ntBASIC5.45□□□□□ -1.54
RFC3P40938 OR8G3P-202ENST00000641572 1255 ntBASIC5.45□□□□□ -1.54
RFC3P40938 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.45□□□□□ -1.54
RFC3P40938 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.45□□□□□ -1.54
RFC3P40938 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RFC3P40938 LINC01616-201ENST00000561816 2280 ntBASIC5.45□□□□□ -1.54
RFC3P40938 ZNF101P1-201ENST00000435701 1720 ntBASIC5.45□□□□□ -1.54
RFC3P40938 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.45□□□□□ -1.54
RFC3P40938 CCNT2P1-201ENST00000423082 1315 ntBASIC5.45□□□□□ -1.54
RFC3P40938 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
RFC3P40938 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
RFC3P40938 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.45□□□□□ -1.54
RFC3P40938 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RFC3P40938 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.45□□□□□ -1.54
RFC3P40938 AC004158.1-201ENST00000564508 4319 ntBASIC5.44□□□□□ -1.54
RFC3P40938 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RFC3P40938 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
RFC3P40938 LINC02019-201ENST00000608605 2060 ntBASIC5.44□□□□□ -1.54
RFC3P40938 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RFC3P40938 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.44□□□□□ -1.54
RFC3P40938 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.44□□□□□ -1.54
RFC3P40938 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.44□□□□□ -1.54
RFC3P40938 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RFC3P40938 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RFC3P40938 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RFC3P40938 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
RFC3P40938 SELENOWP1-201ENST00000322792 252 ntBASIC5.44□□□□□ -1.54
RFC3P40938 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
RFC3P40938 RNU1-150P-201ENST00000362491 162 ntBASIC5.44□□□□□ -1.54
RFC3P40938 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.44□□□□□ -1.54
RFC3P40938 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
RFC3P40938 EEF1B2P8-201ENST00000414101 671 ntBASIC5.44□□□□□ -1.54
RFC3P40938 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.44□□□□□ -1.54
RFC3P40938 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RFC3P40938 BX119321.1-201ENST00000428912 797 ntBASIC5.44□□□□□ -1.54
RFC3P40938 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.44□□□□□ -1.54
RFC3P40938 TUBB4BP6-201ENST00000437576 479 ntBASIC5.44□□□□□ -1.54
RFC3P40938 AL512637.1-201ENST00000439523 1231 ntBASIC5.44□□□□□ -1.54
RFC3P40938 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
RFC3P40938 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.44□□□□□ -1.54
RFC3P40938 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.44□□□□□ -1.54
RFC3P40938 GEMIN2P1-201ENST00000454246 752 ntBASIC5.44□□□□□ -1.54
RFC3P40938 NXT1P1-201ENST00000458481 316 ntBASIC5.44□□□□□ -1.54
RFC3P40938 RN7SL57P-201ENST00000493687 290 ntBASIC5.44□□□□□ -1.54
RFC3P40938 AC106872.4-201ENST00000510050 523 ntBASIC5.44□□□□□ -1.54
RFC3P40938 TPM3P3-201ENST00000521343 354 ntBASIC5.44□□□□□ -1.54
RFC3P40938 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RFC3P40938 IGLV3-30-201ENST00000524362 298 ntBASIC5.44□□□□□ -1.54
RFC3P40938 AC110056.1-201ENST00000525759 911 ntBASIC5.44□□□□□ -1.54
RFC3P40938 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RFC3P40938 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.44□□□□□ -1.54
RFC3P40938 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RFC3P40938 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.44□□□□□ -1.54
RFC3P40938 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RFC3P40938 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RFC3P40938 AC011445.2-201ENST00000599274 173 ntBASIC5.44□□□□□ -1.54
RFC3P40938 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
RFC3P40938 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.44□□□□□ -1.54
RFC3P40938 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
RFC3P40938 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.44□□□□□ -1.54
RFC3P40938 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.44□□□□□ -1.54
RFC3P40938 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RFC3P40938 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
RFC3P40938 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC5.44□□□□□ -1.54
RFC3P40938 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RFC3P40938 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RFC3P40938 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RFC3P40938 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
RFC3P40938 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
RFC3P40938 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RFC3P40938 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.44□□□□□ -1.54
RFC3P40938 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RFC3P40938 AC010266.2-201ENST00000564741 3255 ntBASIC5.43□□□□□ -1.54
RFC3P40938 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RFC3P40938 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
RFC3P40938 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RFC3P40938 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
RFC3P40938 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
RFC3P40938 AC015689.2-201ENST00000528172 1738 ntBASIC5.43□□□□□ -1.54
RFC3P40938 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RFC3P40938 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
RFC3P40938 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.43□□□□□ -1.54
RFC3P40938 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
RFC3P40938 AC106872.5-201ENST00000508856 1416 ntBASIC5.43□□□□□ -1.54
RFC3P40938 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
RFC3P40938 SNORA51.1-201ENST00000363243 140 ntBASIC5.43□□□□□ -1.54
RFC3P40938 RNA5SP242-201ENST00000364171 118 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms