Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC6.19□□□□□ -1.42
CASQ1P31415 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC6.19□□□□□ -1.42
CASQ1P31415 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.19□□□□□ -1.42
CASQ1P31415 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC6.19□□□□□ -1.42
CASQ1P31415 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.19□□□□□ -1.42
CASQ1P31415 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.19□□□□□ -1.42
CASQ1P31415 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.19□□□□□ -1.42
CASQ1P31415 OR4A17P-201ENST00000526032 904 ntBASIC6.19□□□□□ -1.42
CASQ1P31415 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.19□□□□□ -1.42
CASQ1P31415 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.19□□□□□ -1.42
CASQ1P31415 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC6.19□□□□□ -1.42
CASQ1P31415 MIR6762-201ENST00000613340 86 ntBASIC6.19□□□□□ -1.42
CASQ1P31415 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.19□□□□□ -1.42
CASQ1P31415 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CASQ1P31415 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC6.19□□□□□ -1.42
CASQ1P31415 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
CASQ1P31415 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CASQ1P31415 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.19□□□□□ -1.42
CASQ1P31415 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.19□□□□□ -1.42
CASQ1P31415 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
CASQ1P31415 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CASQ1P31415 AC083843.2-201ENST00000568248 6253 ntBASIC6.19□□□□□ -1.42
CASQ1P31415 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CASQ1P31415 CASC19-255ENST00000641733 1385 ntBASIC6.18□□□□□ -1.42
CASQ1P31415 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CASQ1P31415 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
CASQ1P31415 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CASQ1P31415 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CASQ1P31415 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC6.18□□□□□ -1.42
CASQ1P31415 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CASQ1P31415 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CASQ1P31415 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.18□□□□□ -1.42
CASQ1P31415 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.18□□□□□ -1.42
CASQ1P31415 SNRPEP6-201ENST00000407465 277 ntBASIC6.18□□□□□ -1.42
CASQ1P31415 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.18□□□□□ -1.42
CASQ1P31415 MTND2P12-201ENST00000417560 1252 ntBASIC6.18□□□□□ -1.42
CASQ1P31415 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CASQ1P31415 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.18□□□□□ -1.42
CASQ1P31415 AL591623.2-201ENST00000449978 222 ntBASIC6.18□□□□□ -1.42
CASQ1P31415 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.18□□□□□ -1.42
CASQ1P31415 RPS10P28-201ENST00000480396 498 ntBASIC6.18□□□□□ -1.42
CASQ1P31415 AC105384.2-201ENST00000508433 640 ntBASIC6.18□□□□□ -1.42
CASQ1P31415 RAD21-204ENST00000518055 896 ntTSL 2 BASIC6.18□□□□□ -1.42
CASQ1P31415 OR10D4P-201ENST00000525892 951 ntBASIC6.18□□□□□ -1.42
CASQ1P31415 AC135983.3-201ENST00000528049 1226 ntBASIC6.18□□□□□ -1.42
CASQ1P31415 NPIPB14P-203ENST00000532298 987 ntBASIC6.18□□□□□ -1.42
CASQ1P31415 AC089984.3-201ENST00000552838 363 ntBASIC6.18□□□□□ -1.42
CASQ1P31415 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC6.18□□□□□ -1.42
CASQ1P31415 GARSP1-201ENST00000570895 719 ntBASIC6.18□□□□□ -1.42
CASQ1P31415 AC006120.1-201ENST00000579375 546 ntBASIC6.18□□□□□ -1.42
CASQ1P31415 AP005262.1-201ENST00000582646 997 ntBASIC6.18□□□□□ -1.42
CASQ1P31415 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.18□□□□□ -1.42
CASQ1P31415 AC010632.3-201ENST00000611377 369 ntBASIC6.18□□□□□ -1.42
CASQ1P31415 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.18□□□□□ -1.42
CASQ1P31415 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC6.18□□□□□ -1.42
CASQ1P31415 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CASQ1P31415 AL357562.1-201ENST00000624911 609 ntBASIC6.18□□□□□ -1.42
CASQ1P31415 AL355480.4-201ENST00000626823 69 ntBASIC6.18□□□□□ -1.42
CASQ1P31415 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CASQ1P31415 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.18□□□□□ -1.42
CASQ1P31415 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
CASQ1P31415 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
CASQ1P31415 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
CASQ1P31415 AC245100.2-201ENST00000454544 1679 ntBASIC6.17□□□□□ -1.42
CASQ1P31415 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.17□□□□□ -1.42
CASQ1P31415 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC6.17□□□□□ -1.42
CASQ1P31415 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CASQ1P31415 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CASQ1P31415 RNA5SP485-201ENST00000365053 119 ntBASIC6.17□□□□□ -1.42
CASQ1P31415 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CASQ1P31415 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CASQ1P31415 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CASQ1P31415 PTP4A1P1-201ENST00000420539 515 ntBASIC6.17□□□□□ -1.42
CASQ1P31415 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC6.17□□□□□ -1.42
CASQ1P31415 AC019185.3-201ENST00000438805 323 ntBASIC6.17□□□□□ -1.42
CASQ1P31415 AC015983.1-201ENST00000441577 373 ntBASIC6.17□□□□□ -1.42
CASQ1P31415 AC023141.8-201ENST00000442554 208 ntBASIC6.17□□□□□ -1.42
CASQ1P31415 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.17□□□□□ -1.42
CASQ1P31415 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CASQ1P31415 RPS7P6-201ENST00000485777 579 ntBASIC6.17□□□□□ -1.42
CASQ1P31415 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CASQ1P31415 AC008629.2-201ENST00000503783 483 ntBASIC6.17□□□□□ -1.42
CASQ1P31415 RFPL4AP3-201ENST00000515267 345 ntBASIC6.17□□□□□ -1.42
CASQ1P31415 MINOS1P4-201ENST00000515470 318 ntBASIC6.17□□□□□ -1.42
CASQ1P31415 SEPT10P1-201ENST00000517342 1162 ntBASIC6.17□□□□□ -1.42
CASQ1P31415 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.17□□□□□ -1.42
CASQ1P31415 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC6.17□□□□□ -1.42
CASQ1P31415 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.17□□□□□ -1.42
CASQ1P31415 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC6.17□□□□□ -1.42
CASQ1P31415 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC6.17□□□□□ -1.42
CASQ1P31415 AL139124.1-201ENST00000609123 421 ntBASIC6.17□□□□□ -1.42
CASQ1P31415 AP003108.4-201ENST00000623917 878 ntBASIC6.17□□□□□ -1.42
CASQ1P31415 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.17□□□□□ -1.42
CASQ1P31415 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.17□□□□□ -1.42
CASQ1P31415 MFSD8-219ENST00000641228 2559 ntBASIC6.17□□□□□ -1.42
CASQ1P31415 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
CASQ1P31415 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CASQ1P31415 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.17□□□□□ -1.42
CASQ1P31415 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CASQ1P31415 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms