Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 MIR1269B-201ENST00000580405 75 ntBASIC9.03□□□□□ -0.96
CLIP1P30622 AC012616.1-201ENST00000600294 197 ntBASIC9.03□□□□□ -0.96
CLIP1P30622 AC008536.1-201ENST00000602872 669 ntBASIC9.03□□□□□ -0.96
CLIP1P30622 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
CLIP1P30622 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC9.03□□□□□ -0.96
CLIP1P30622 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC9.03□□□□□ -0.96
CLIP1P30622 SAMMSON-227ENST00000642114 1199 ntBASIC9.03□□□□□ -0.96
CLIP1P30622 AC087516.1-201ENST00000561236 2428 ntBASIC9.03□□□□□ -0.96
CLIP1P30622 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
CLIP1P30622 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC9.03□□□□□ -0.96
CLIP1P30622 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
CLIP1P30622 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CLIP1P30622 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC9.03□□□□□ -0.96
CLIP1P30622 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
CLIP1P30622 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.96
CLIP1P30622 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC9.02□□□□□ -0.96
CLIP1P30622 PWAR1-201ENST00000624188 2414 ntBASIC9.02□□□□□ -0.97
CLIP1P30622 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
CLIP1P30622 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
CLIP1P30622 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC9.02□□□□□ -0.97
CLIP1P30622 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CLIP1P30622 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC9.02□□□□□ -0.97
CLIP1P30622 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CLIP1P30622 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
CLIP1P30622 AC025470.1-201ENST00000510053 2032 ntBASIC9.02□□□□□ -0.97
CLIP1P30622 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
CLIP1P30622 SNORA74A-201ENST00000364089 198 ntBASIC9.02□□□□□ -0.97
CLIP1P30622 GAPDHP42-201ENST00000406848 981 ntBASIC9.02□□□□□ -0.97
CLIP1P30622 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
CLIP1P30622 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC9.02□□□□□ -0.97
CLIP1P30622 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC9.02□□□□□ -0.97
CLIP1P30622 AC044860.2-201ENST00000561005 179 ntBASIC9.02□□□□□ -0.97
CLIP1P30622 MIR6730-201ENST00000622213 67 ntBASIC9.02□□□□□ -0.97
CLIP1P30622 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CLIP1P30622 CASC19-248ENST00000641674 1356 ntBASIC9.02□□□□□ -0.97
CLIP1P30622 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC9.02□□□□□ -0.97
CLIP1P30622 C4BPAP1-201ENST00000415474 1893 ntBASIC9.02□□□□□ -0.97
CLIP1P30622 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CLIP1P30622 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
CLIP1P30622 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
CLIP1P30622 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CLIP1P30622 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
CLIP1P30622 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC9.01□□□□□ -0.97
CLIP1P30622 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC9.01□□□□□ -0.97
CLIP1P30622 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CLIP1P30622 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CLIP1P30622 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC9.01□□□□□ -0.97
CLIP1P30622 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
CLIP1P30622 RNU1-19P-201ENST00000363306 165 ntBASIC9.01□□□□□ -0.97
CLIP1P30622 MIR1286-201ENST00000408112 78 ntBASIC9.01□□□□□ -0.97
CLIP1P30622 FIGN-202ENST00000409634 746 ntTSL 5 BASIC9.01□□□□□ -0.97
CLIP1P30622 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC9.01□□□□□ -0.97
CLIP1P30622 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC9.01□□□□□ -0.97
CLIP1P30622 VN1R21P-201ENST00000426703 765 ntBASIC9.01□□□□□ -0.97
CLIP1P30622 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC9.01□□□□□ -0.97
CLIP1P30622 RPS7P6-201ENST00000485777 579 ntBASIC9.01□□□□□ -0.97
CLIP1P30622 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC9.01□□□□□ -0.97
CLIP1P30622 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC9.01□□□□□ -0.97
CLIP1P30622 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC9.01□□□□□ -0.97
CLIP1P30622 HIRAP1-201ENST00000605318 787 ntBASIC9.01□□□□□ -0.97
CLIP1P30622 AC008115.4-201ENST00000619780 775 ntBASIC9.01□□□□□ -0.97
CLIP1P30622 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC9.01□□□□□ -0.97
CLIP1P30622 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CLIP1P30622 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC9.01□□□□□ -0.97
CLIP1P30622 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC9.01□□□□□ -0.97
CLIP1P30622 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC9□□□□□ -0.97
CLIP1P30622 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CLIP1P30622 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
CLIP1P30622 BPHL-201ENST00000380368 797 ntTSL 5 BASIC9□□□□□ -0.97
CLIP1P30622 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC9□□□□□ -0.97
CLIP1P30622 CRIP1P1-201ENST00000427567 185 ntBASIC9□□□□□ -0.97
CLIP1P30622 AP001804.1-201ENST00000526868 919 ntBASIC9□□□□□ -0.97
CLIP1P30622 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC9□□□□□ -0.97
CLIP1P30622 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC9□□□□□ -0.97
CLIP1P30622 AC005229.3-201ENST00000603438 323 ntBASIC9□□□□□ -0.97
CLIP1P30622 NANOGP3-201ENST00000605855 286 ntBASIC9□□□□□ -0.97
CLIP1P30622 AC004948.1-201ENST00000609858 672 ntBASIC9□□□□□ -0.97
CLIP1P30622 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC9□□□□□ -0.97
CLIP1P30622 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC9□□□□□ -0.97
CLIP1P30622 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC9□□□□□ -0.97
CLIP1P30622 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC9□□□□□ -0.97
CLIP1P30622 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC9□□□□□ -0.97
CLIP1P30622 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC9□□□□□ -0.97
CLIP1P30622 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC9□□□□□ -0.97
CLIP1P30622 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CLIP1P30622 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
CLIP1P30622 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC9□□□□□ -0.97
CLIP1P30622 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC9□□□□□ -0.97
CLIP1P30622 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CLIP1P30622 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC8.99□□□□□ -0.97
CLIP1P30622 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
CLIP1P30622 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC8.99□□□□□ -0.97
CLIP1P30622 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC8.99□□□□□ -0.97
CLIP1P30622 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC8.99□□□□□ -0.97
CLIP1P30622 LDHAP2-201ENST00000437325 985 ntBASIC8.99□□□□□ -0.97
CLIP1P30622 KRT8P51-201ENST00000438938 274 ntBASIC8.99□□□□□ -0.97
CLIP1P30622 AL450996.1-201ENST00000445574 1202 ntBASIC8.99□□□□□ -0.97
CLIP1P30622 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC8.99□□□□□ -0.97
CLIP1P30622 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC8.99□□□□□ -0.97
CLIP1P30622 AL513327.3-201ENST00000602618 469 ntBASIC8.99□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms