Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
RFX1P22670 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
RFX1P22670 AL591363.1-201ENST00000450091 483 ntBASIC8.02□□□□□ -1.13
RFX1P22670 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RFX1P22670 AL606490.1-201ENST00000452266 765 ntBASIC8.02□□□□□ -1.13
RFX1P22670 AC073476.1-201ENST00000452854 407 ntBASIC8.02□□□□□ -1.13
RFX1P22670 DNAJC19P8-201ENST00000452887 259 ntBASIC8.02□□□□□ -1.13
RFX1P22670 AC092687.2-201ENST00000452909 568 ntTSL 5 BASIC8.02□□□□□ -1.13
RFX1P22670 MTCO3P11-201ENST00000455103 774 ntBASIC8.02□□□□□ -1.13
RFX1P22670 AC022730.1-201ENST00000473114 568 ntBASIC8.02□□□□□ -1.13
RFX1P22670 AC009153.1-201ENST00000485799 496 ntBASIC8.02□□□□□ -1.13
RFX1P22670 NCOR1P1-202ENST00000486162 291 ntBASIC8.02□□□□□ -1.13
RFX1P22670 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RFX1P22670 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC8.02□□□□□ -1.13
RFX1P22670 CDC42P4-201ENST00000510507 563 ntBASIC8.02□□□□□ -1.13
RFX1P22670 RNU6-1178P-201ENST00000516674 107 ntBASIC8.02□□□□□ -1.13
RFX1P22670 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC8.02□□□□□ -1.13
RFX1P22670 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC8.02□□□□□ -1.13
RFX1P22670 NPIPB14P-203ENST00000532298 987 ntBASIC8.02□□□□□ -1.13
RFX1P22670 SAA3P-201ENST00000533267 365 ntBASIC8.02□□□□□ -1.13
RFX1P22670 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC8.02□□□□□ -1.13
RFX1P22670 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC8.02□□□□□ -1.13
RFX1P22670 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RFX1P22670 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC8.02□□□□□ -1.13
RFX1P22670 AC012435.1-202ENST00000568772 240 ntBASIC8.02□□□□□ -1.13
RFX1P22670 AL121834.1-201ENST00000572284 509 ntBASIC8.02□□□□□ -1.13
RFX1P22670 AC096708.2-201ENST00000577676 512 ntBASIC8.02□□□□□ -1.13
RFX1P22670 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC8.02□□□□□ -1.13
RFX1P22670 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RFX1P22670 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC8.02□□□□□ -1.13
RFX1P22670 AP001267.4-201ENST00000602598 545 ntBASIC8.02□□□□□ -1.13
RFX1P22670 AC004852.1-201ENST00000605206 154 ntBASIC8.02□□□□□ -1.13
RFX1P22670 AC131235.4-201ENST00000609288 620 ntBASIC8.02□□□□□ -1.13
RFX1P22670 MIR6070-201ENST00000613967 103 ntBASIC8.02□□□□□ -1.13
RFX1P22670 MIR6813-201ENST00000621638 56 ntBASIC8.02□□□□□ -1.13
RFX1P22670 AC116618.1-201ENST00000634617 774 ntBASIC8.02□□□□□ -1.13
RFX1P22670 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
RFX1P22670 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC8.02□□□□□ -1.13
RFX1P22670 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RFX1P22670 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
RFX1P22670 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC8.02□□□□□ -1.13
RFX1P22670 HDAC1P1-201ENST00000455482 1445 ntBASIC8.02□□□□□ -1.13
RFX1P22670 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC8.02□□□□□ -1.13
RFX1P22670 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC8.02□□□□□ -1.13
RFX1P22670 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
RFX1P22670 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
RFX1P22670 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RFX1P22670 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RFX1P22670 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
RFX1P22670 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC8.01□□□□□ -1.13
RFX1P22670 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RFX1P22670 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
RFX1P22670 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RFX1P22670 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
RFX1P22670 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RFX1P22670 Z96074.1-203ENST00000637685 1746 ntTSL 5 BASIC8.01□□□□□ -1.13
RFX1P22670 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC8.01□□□□□ -1.13
RFX1P22670 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
RFX1P22670 EEF1A1P5-201ENST00000436459 1389 ntBASIC8.01□□□□□ -1.13
RFX1P22670 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RFX1P22670 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RFX1P22670 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RFX1P22670 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RFX1P22670 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC8.01□□□□□ -1.13
RFX1P22670 HMGB1P5-201ENST00000255320 642 ntBASIC8.01□□□□□ -1.13
RFX1P22670 AC023886.2-201ENST00000321285 411 ntBASIC8.01□□□□□ -1.13
RFX1P22670 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RFX1P22670 RNU4-21P-201ENST00000362802 126 ntBASIC8.01□□□□□ -1.13
RFX1P22670 RN7SKP211-201ENST00000363328 315 ntBASIC8.01□□□□□ -1.13
RFX1P22670 RNA5SP302-201ENST00000364896 100 ntBASIC8.01□□□□□ -1.13
RFX1P22670 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RFX1P22670 MRPL32P1-201ENST00000406301 247 ntBASIC8.01□□□□□ -1.13
RFX1P22670 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
RFX1P22670 PGBD4P8-201ENST00000412993 562 ntBASIC8.01□□□□□ -1.13
RFX1P22670 TPT1P2-201ENST00000413105 503 ntBASIC8.01□□□□□ -1.13
RFX1P22670 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC8.01□□□□□ -1.13
RFX1P22670 BLOC1S2P1-201ENST00000428431 301 ntBASIC8.01□□□□□ -1.13
RFX1P22670 AC092162.2-203ENST00000430460 579 ntTSL 4 BASIC8.01□□□□□ -1.13
RFX1P22670 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC8.01□□□□□ -1.13
RFX1P22670 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC8.01□□□□□ -1.13
RFX1P22670 AL592114.2-201ENST00000440142 532 ntBASIC8.01□□□□□ -1.13
RFX1P22670 MTND1P30-201ENST00000441241 901 ntBASIC8.01□□□□□ -1.13
RFX1P22670 FUNDC2P2-202ENST00000443452 493 ntBASIC8.01□□□□□ -1.13
RFX1P22670 CDC27P1-201ENST00000445384 715 ntBASIC8.01□□□□□ -1.13
RFX1P22670 ZNF619P1-201ENST00000446539 752 ntBASIC8.01□□□□□ -1.13
RFX1P22670 AC002486.2-201ENST00000447806 590 ntBASIC8.01□□□□□ -1.13
RFX1P22670 FAR2P1-206ENST00000449736 709 ntBASIC8.01□□□□□ -1.13
RFX1P22670 AC015820.1-201ENST00000473882 321 ntBASIC8.01□□□□□ -1.13
RFX1P22670 AC104687.1-201ENST00000485829 412 ntBASIC8.01□□□□□ -1.13
RFX1P22670 ANK3-213ENST00000486349 493 ntTSL 2 BASIC8.01□□□□□ -1.13
RFX1P22670 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RFX1P22670 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RFX1P22670 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC8.01□□□□□ -1.13
RFX1P22670 AC055733.3-201ENST00000505214 523 ntBASIC8.01□□□□□ -1.13
RFX1P22670 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC8.01□□□□□ -1.13
RFX1P22670 AC006070.1-201ENST00000508151 193 ntBASIC8.01□□□□□ -1.13
RFX1P22670 IGJP1-201ENST00000522682 475 ntBASIC8.01□□□□□ -1.13
RFX1P22670 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC8.01□□□□□ -1.13
RFX1P22670 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC8.01□□□□□ -1.13
RFX1P22670 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC8.01□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms