Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.92□□□□□ -1.14
LMNB1P20700 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC7.92□□□□□ -1.14
LMNB1P20700 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
LMNB1P20700 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC7.91□□□□□ -1.14
LMNB1P20700 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC7.91□□□□□ -1.14
LMNB1P20700 ABCA11P-202ENST00000504019 2110 ntBASIC7.91□□□□□ -1.14
LMNB1P20700 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
LMNB1P20700 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC7.91□□□□□ -1.14
LMNB1P20700 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC7.91□□□□□ -1.14
LMNB1P20700 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
LMNB1P20700 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC7.91□□□□□ -1.14
LMNB1P20700 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.91□□□□□ -1.14
LMNB1P20700 MFSD8-217ENST00000641178 4374 ntBASIC7.91□□□□□ -1.14
LMNB1P20700 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
LMNB1P20700 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
LMNB1P20700 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
LMNB1P20700 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
LMNB1P20700 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
LMNB1P20700 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
LMNB1P20700 OR52B3P-201ENST00000314715 928 ntBASIC7.91□□□□□ -1.14
LMNB1P20700 RNA5SP273-201ENST00000362484 113 ntBASIC7.91□□□□□ -1.14
LMNB1P20700 RNA5SP110-201ENST00000362638 115 ntBASIC7.91□□□□□ -1.14
LMNB1P20700 RNU6-207P-201ENST00000384137 107 ntBASIC7.91□□□□□ -1.14
LMNB1P20700 RNU6-481P-201ENST00000384194 107 ntBASIC7.91□□□□□ -1.14
LMNB1P20700 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
LMNB1P20700 NPM1P36-201ENST00000415681 835 ntBASIC7.91□□□□□ -1.14
LMNB1P20700 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC7.91□□□□□ -1.14
LMNB1P20700 OSTCP5-201ENST00000425293 453 ntBASIC7.91□□□□□ -1.14
LMNB1P20700 RPL5P2-201ENST00000429598 854 ntBASIC7.91□□□□□ -1.14
LMNB1P20700 BX119917.1-201ENST00000432517 502 ntBASIC7.91□□□□□ -1.14
LMNB1P20700 THAP5P1-201ENST00000439089 262 ntBASIC7.91□□□□□ -1.14
LMNB1P20700 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC7.91□□□□□ -1.14
LMNB1P20700 SNRPFP2-201ENST00000440710 251 ntBASIC7.91□□□□□ -1.14
LMNB1P20700 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC7.91□□□□□ -1.14
LMNB1P20700 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC7.91□□□□□ -1.14
LMNB1P20700 RPSAP39-201ENST00000467439 883 ntBASIC7.91□□□□□ -1.14
LMNB1P20700 RPS17P11-201ENST00000474297 293 ntBASIC7.91□□□□□ -1.14
LMNB1P20700 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC7.91□□□□□ -1.14
LMNB1P20700 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
LMNB1P20700 AC134050.1-201ENST00000495088 933 ntBASIC7.91□□□□□ -1.14
LMNB1P20700 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC7.91□□□□□ -1.14
LMNB1P20700 AC015864.1-201ENST00000496512 544 ntBASIC7.91□□□□□ -1.14
LMNB1P20700 AC010486.2-201ENST00000505572 483 ntBASIC7.91□□□□□ -1.14
LMNB1P20700 AC067904.2-201ENST00000517322 1283 ntBASIC7.91□□□□□ -1.14
LMNB1P20700 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC7.91□□□□□ -1.14
LMNB1P20700 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC7.91□□□□□ -1.14
LMNB1P20700 AP003396.4-201ENST00000527574 265 ntBASIC7.91□□□□□ -1.14
LMNB1P20700 SMARCE1P3-201ENST00000553649 1231 ntBASIC7.91□□□□□ -1.14
LMNB1P20700 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC7.91□□□□□ -1.14
LMNB1P20700 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC7.91□□□□□ -1.14
LMNB1P20700 AC090651.1-201ENST00000567865 634 ntBASIC7.91□□□□□ -1.14
LMNB1P20700 AC027455.1-201ENST00000574104 594 ntBASIC7.91□□□□□ -1.14
LMNB1P20700 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC7.91□□□□□ -1.14
LMNB1P20700 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC7.91□□□□□ -1.14
LMNB1P20700 AC010620.1-201ENST00000601088 1102 ntBASIC7.91□□□□□ -1.14
LMNB1P20700 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC7.91□□□□□ -1.14
LMNB1P20700 AC079880.2-201ENST00000603790 1213 ntBASIC7.91□□□□□ -1.14
LMNB1P20700 AC096586.1-201ENST00000610267 561 ntBASIC7.91□□□□□ -1.14
LMNB1P20700 AL352984.2-201ENST00000611153 546 ntBASIC7.91□□□□□ -1.14
LMNB1P20700 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC7.91□□□□□ -1.14
LMNB1P20700 AC090617.9-201ENST00000623751 147 ntBASIC7.91□□□□□ -1.14
LMNB1P20700 AC018692.2-201ENST00000624130 348 ntBASIC7.91□□□□□ -1.14
LMNB1P20700 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC7.91□□□□□ -1.14
LMNB1P20700 WDR75-207ENST00000631047 270 ntTSL 5 BASIC7.91□□□□□ -1.14
LMNB1P20700 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
LMNB1P20700 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC7.91□□□□□ -1.14
LMNB1P20700 AC078880.4-201ENST00000617627 1749 ntBASIC7.91□□□□□ -1.14
LMNB1P20700 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC7.91□□□□□ -1.14
LMNB1P20700 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
LMNB1P20700 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
LMNB1P20700 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
LMNB1P20700 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
LMNB1P20700 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC7.91□□□□□ -1.14
LMNB1P20700 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
LMNB1P20700 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC7.91□□□□□ -1.14
LMNB1P20700 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
LMNB1P20700 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
LMNB1P20700 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
LMNB1P20700 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
LMNB1P20700 PARN-201ENST00000341484 2100 ntTSL 2 BASIC7.9□□□□□ -1.14
LMNB1P20700 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC7.9□□□□□ -1.14
LMNB1P20700 AL359694.2-201ENST00000567753 1615 ntBASIC7.9□□□□□ -1.14
LMNB1P20700 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
LMNB1P20700 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC7.9□□□□□ -1.14
LMNB1P20700 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
LMNB1P20700 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
LMNB1P20700 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
LMNB1P20700 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
LMNB1P20700 FUNDC2P3-201ENST00000334716 533 ntBASIC7.9□□□□□ -1.14
LMNB1P20700 RNU6-1331P-201ENST00000363658 106 ntBASIC7.9□□□□□ -1.14
LMNB1P20700 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC7.9□□□□□ -1.14
LMNB1P20700 AC119751.3-201ENST00000399720 670 ntBASIC7.9□□□□□ -1.14
LMNB1P20700 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC7.9□□□□□ -1.14
LMNB1P20700 AL513325.1-201ENST00000417716 1034 ntBASIC7.9□□□□□ -1.14
LMNB1P20700 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
LMNB1P20700 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC7.9□□□□□ -1.14
LMNB1P20700 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
LMNB1P20700 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC7.9□□□□□ -1.14
LMNB1P20700 AC023141.3-201ENST00000436698 278 ntBASIC7.9□□□□□ -1.14
LMNB1P20700 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC7.9□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms