Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC7.42□□□□□ -1.22
NFKB1P19838 MFSD8-217ENST00000641178 4374 ntBASIC7.42□□□□□ -1.22
NFKB1P19838 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
NFKB1P19838 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC7.42□□□□□ -1.22
NFKB1P19838 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC7.42□□□□□ -1.22
NFKB1P19838 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC7.42□□□□□ -1.22
NFKB1P19838 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
NFKB1P19838 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
NFKB1P19838 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
NFKB1P19838 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
NFKB1P19838 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
NFKB1P19838 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
NFKB1P19838 AL157713.1-201ENST00000379752 1531 ntBASIC7.42□□□□□ -1.22
NFKB1P19838 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC7.42□□□□□ -1.22
NFKB1P19838 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC7.42□□□□□ -1.22
NFKB1P19838 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.42□□□□□ -1.22
NFKB1P19838 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
NFKB1P19838 AL136298.2-201ENST00000556497 1570 ntBASIC7.42□□□□□ -1.22
NFKB1P19838 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
NFKB1P19838 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC7.41□□□□□ -1.22
NFKB1P19838 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC7.41□□□□□ -1.22
NFKB1P19838 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.41□□□□□ -1.22
NFKB1P19838 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NFKB1P19838 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
NFKB1P19838 AP005901.5-201ENST00000545779 1796 ntBASIC7.41□□□□□ -1.22
NFKB1P19838 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
NFKB1P19838 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC7.41□□□□□ -1.22
NFKB1P19838 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC7.41□□□□□ -1.22
NFKB1P19838 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.41□□□□□ -1.22
NFKB1P19838 INSL5-201ENST00000304526 715 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NFKB1P19838 ARMCX7P-201ENST00000372828 562 ntBASIC7.41□□□□□ -1.22
NFKB1P19838 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NFKB1P19838 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
NFKB1P19838 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
NFKB1P19838 RPL17P50-201ENST00000396131 546 ntBASIC7.41□□□□□ -1.22
NFKB1P19838 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC7.41□□□□□ -1.22
NFKB1P19838 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC7.41□□□□□ -1.22
NFKB1P19838 Z97055.1-201ENST00000419730 712 ntBASIC7.41□□□□□ -1.22
NFKB1P19838 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC7.41□□□□□ -1.22
NFKB1P19838 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC7.41□□□□□ -1.22
NFKB1P19838 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC7.41□□□□□ -1.22
NFKB1P19838 TRIM60P3Y-201ENST00000432201 673 ntBASIC7.41□□□□□ -1.22
NFKB1P19838 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC7.41□□□□□ -1.22
NFKB1P19838 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC7.41□□□□□ -1.22
NFKB1P19838 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC7.41□□□□□ -1.22
NFKB1P19838 AL353898.1-201ENST00000444055 238 ntBASIC7.41□□□□□ -1.22
NFKB1P19838 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
NFKB1P19838 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC7.41□□□□□ -1.22
NFKB1P19838 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NFKB1P19838 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC7.41□□□□□ -1.22
NFKB1P19838 EIF3LP2-201ENST00000457262 807 ntBASIC7.41□□□□□ -1.22
NFKB1P19838 RN7SL445P-201ENST00000495609 293 ntBASIC7.41□□□□□ -1.22
NFKB1P19838 PFN2-217ENST00000498307 556 ntTSL 4 BASIC7.41□□□□□ -1.22
NFKB1P19838 GAPDHP38-201ENST00000503632 1002 ntBASIC7.41□□□□□ -1.22
NFKB1P19838 MTCO2P30-201ENST00000503662 364 ntBASIC7.41□□□□□ -1.22
NFKB1P19838 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
NFKB1P19838 FAM92A1P2-202ENST00000504766 877 ntBASIC7.41□□□□□ -1.22
NFKB1P19838 PRELID3BP4-201ENST00000515476 571 ntBASIC7.41□□□□□ -1.22
NFKB1P19838 RNU6-507P-201ENST00000516045 100 ntBASIC7.41□□□□□ -1.22
NFKB1P19838 AC120036.3-201ENST00000517826 292 ntBASIC7.41□□□□□ -1.22
NFKB1P19838 IGLVI-42-201ENST00000522485 381 ntBASIC7.41□□□□□ -1.22
NFKB1P19838 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC7.41□□□□□ -1.22
NFKB1P19838 DEFB108A-201ENST00000530110 222 ntBASIC7.41□□□□□ -1.22
NFKB1P19838 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC7.41□□□□□ -1.22
NFKB1P19838 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC7.41□□□□□ -1.22
NFKB1P19838 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
NFKB1P19838 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC7.41□□□□□ -1.22
NFKB1P19838 HNRNPA1P71-201ENST00000559135 950 ntBASIC7.41□□□□□ -1.22
NFKB1P19838 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC7.41□□□□□ -1.22
NFKB1P19838 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC7.41□□□□□ -1.22
NFKB1P19838 AC024451.4-201ENST00000602578 752 ntBASIC7.41□□□□□ -1.22
NFKB1P19838 AC012640.3-201ENST00000607847 430 ntBASIC7.41□□□□□ -1.22
NFKB1P19838 AC064836.2-201ENST00000609491 462 ntBASIC7.41□□□□□ -1.22
NFKB1P19838 FAM27E3-202ENST00000614611 340 ntBASIC7.41□□□□□ -1.22
NFKB1P19838 AL357080.1-201ENST00000617394 239 ntBASIC7.41□□□□□ -1.22
NFKB1P19838 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC7.41□□□□□ -1.22
NFKB1P19838 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC7.41□□□□□ -1.22
NFKB1P19838 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
NFKB1P19838 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC7.41□□□□□ -1.22
NFKB1P19838 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
NFKB1P19838 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
NFKB1P19838 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NFKB1P19838 DDX10P2-201ENST00000417796 2614 ntBASIC7.41□□□□□ -1.22
NFKB1P19838 MRRFP1-201ENST00000435941 1675 ntBASIC7.41□□□□□ -1.22
NFKB1P19838 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
NFKB1P19838 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NFKB1P19838 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NFKB1P19838 AC087392.3-202ENST00000358446 1754 ntBASIC7.41□□□□□ -1.22
NFKB1P19838 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
NFKB1P19838 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NFKB1P19838 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
NFKB1P19838 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
NFKB1P19838 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC7.4□□□□□ -1.22
NFKB1P19838 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
NFKB1P19838 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
NFKB1P19838 AC138915.4-201ENST00000565549 4147 ntBASIC7.4□□□□□ -1.22
NFKB1P19838 AP003119.3-201ENST00000566747 4192 ntBASIC7.4□□□□□ -1.22
NFKB1P19838 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
NFKB1P19838 RNF14-203ENST00000394514 2905 ntTSL 2 BASIC7.4□□□□□ -1.22
NFKB1P19838 AC104581.5-201ENST00000624171 7141 ntBASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms