Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.79□□□□□ -1.48
CDH1P12830 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH1P12830 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CDH1P12830 AP000473.2-201ENST00000602659 1537 ntBASIC5.79□□□□□ -1.48
CDH1P12830 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.78□□□□□ -1.48
CDH1P12830 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH1P12830 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH1P12830 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.78□□□□□ -1.48
CDH1P12830 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH1P12830 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDH1P12830 COX6B1P3-201ENST00000312310 260 ntBASIC5.78□□□□□ -1.48
CDH1P12830 RN7SKP187-201ENST00000365536 330 ntBASIC5.78□□□□□ -1.48
CDH1P12830 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.78□□□□□ -1.48
CDH1P12830 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.78□□□□□ -1.48
CDH1P12830 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.78□□□□□ -1.48
CDH1P12830 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC5.78□□□□□ -1.48
CDH1P12830 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.78□□□□□ -1.48
CDH1P12830 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.78□□□□□ -1.48
CDH1P12830 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.78□□□□□ -1.48
CDH1P12830 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDH1P12830 AMYP1-201ENST00000440059 1023 ntBASIC5.78□□□□□ -1.48
CDH1P12830 RPSAP40-201ENST00000442343 891 ntBASIC5.78□□□□□ -1.48
CDH1P12830 GNL2P1-201ENST00000451274 2190 ntBASIC5.78□□□□□ -1.48
CDH1P12830 SDC4P-201ENST00000453285 601 ntBASIC5.78□□□□□ -1.48
CDH1P12830 TPRKBP1-201ENST00000456243 481 ntBASIC5.78□□□□□ -1.48
CDH1P12830 CTSLP6-201ENST00000458273 1002 ntBASIC5.78□□□□□ -1.48
CDH1P12830 AC104164.1-201ENST00000460282 590 ntBASIC5.78□□□□□ -1.48
CDH1P12830 RN7SL168P-201ENST00000463821 279 ntBASIC5.78□□□□□ -1.48
CDH1P12830 AC090602.1-201ENST00000469695 252 ntBASIC5.78□□□□□ -1.48
CDH1P12830 AGGF1P3-201ENST00000493675 1213 ntBASIC5.78□□□□□ -1.48
CDH1P12830 RN7SL649P-201ENST00000496974 275 ntBASIC5.78□□□□□ -1.48
CDH1P12830 TOMM22P4-201ENST00000511318 336 ntBASIC5.78□□□□□ -1.48
CDH1P12830 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.78□□□□□ -1.48
CDH1P12830 CCNHP1-201ENST00000513311 678 ntBASIC5.78□□□□□ -1.48
CDH1P12830 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.78□□□□□ -1.48
CDH1P12830 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.78□□□□□ -1.48
CDH1P12830 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.78□□□□□ -1.48
CDH1P12830 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDH1P12830 DPPA3P2-202ENST00000557188 1219 ntBASIC5.78□□□□□ -1.48
CDH1P12830 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.78□□□□□ -1.48
CDH1P12830 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.78□□□□□ -1.48
CDH1P12830 AP005119.1-201ENST00000580956 292 ntBASIC5.78□□□□□ -1.48
CDH1P12830 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC5.78□□□□□ -1.48
CDH1P12830 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.78□□□□□ -1.48
CDH1P12830 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.78□□□□□ -1.48
CDH1P12830 AP001437.1-201ENST00000608783 456 ntBASIC5.78□□□□□ -1.48
CDH1P12830 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
CDH1P12830 AC104820.1-201ENST00000624183 307 ntBASIC5.78□□□□□ -1.48
CDH1P12830 AC106730.3-201ENST00000624568 641 ntBASIC5.78□□□□□ -1.48
CDH1P12830 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
CDH1P12830 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CDH1P12830 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
CDH1P12830 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CDH1P12830 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CDH1P12830 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.77□□□□□ -1.49
CDH1P12830 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CDH1P12830 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDH1P12830 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CDH1P12830 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
CDH1P12830 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CDH1P12830 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
CDH1P12830 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CDH1P12830 AL136116.2-201ENST00000404020 785 ntBASIC5.77□□□□□ -1.49
CDH1P12830 MYL6P5-201ENST00000412707 459 ntBASIC5.77□□□□□ -1.49
CDH1P12830 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.77□□□□□ -1.49
CDH1P12830 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.77□□□□□ -1.49
CDH1P12830 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC5.77□□□□□ -1.49
CDH1P12830 SETP9-201ENST00000423837 832 ntBASIC5.77□□□□□ -1.49
CDH1P12830 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CDH1P12830 CUBNP2-201ENST00000443534 1139 ntBASIC5.77□□□□□ -1.49
CDH1P12830 AL445466.1-201ENST00000448432 357 ntBASIC5.77□□□□□ -1.49
CDH1P12830 AL500527.1-201ENST00000448532 255 ntBASIC5.77□□□□□ -1.49
CDH1P12830 AL513343.1-201ENST00000451818 792 ntBASIC5.77□□□□□ -1.49
CDH1P12830 AC068228.1-201ENST00000461723 211 ntBASIC5.77□□□□□ -1.49
CDH1P12830 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.77□□□□□ -1.49
CDH1P12830 RN7SL170P-201ENST00000487098 295 ntBASIC5.77□□□□□ -1.49
CDH1P12830 RPL37P23-201ENST00000492641 294 ntBASIC5.77□□□□□ -1.49
CDH1P12830 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.77□□□□□ -1.49
CDH1P12830 RNU4-18P-201ENST00000516751 149 ntBASIC5.77□□□□□ -1.49
CDH1P12830 AC024405.1-201ENST00000532521 1042 ntBASIC5.77□□□□□ -1.49
CDH1P12830 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.77□□□□□ -1.49
CDH1P12830 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.77□□□□□ -1.49
CDH1P12830 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDH1P12830 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.77□□□□□ -1.49
CDH1P12830 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.77□□□□□ -1.49
CDH1P12830 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.77□□□□□ -1.49
CDH1P12830 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.77□□□□□ -1.49
CDH1P12830 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.77□□□□□ -1.49
CDH1P12830 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.77□□□□□ -1.49
CDH1P12830 AL021918.2-201ENST00000613415 194 ntBASIC5.77□□□□□ -1.49
CDH1P12830 AC096708.4-201ENST00000620563 552 ntBASIC5.77□□□□□ -1.49
CDH1P12830 AC073593.1-201ENST00000624500 411 ntBASIC5.77□□□□□ -1.49
CDH1P12830 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC5.77□□□□□ -1.49
CDH1P12830 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDH1P12830 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.77□□□□□ -1.49
CDH1P12830 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CDH1P12830 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDH1P12830 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDH1P12830 AC138907.8-201ENST00000623981 2256 ntBASIC5.77□□□□□ -1.49
CDH1P12830 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms