Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL11A1P12107 AL162456.1-201ENST00000634535 2006 ntBASIC6.39□□□□□ -1.39
COL11A1P12107 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.39□□□□□ -1.39
COL11A1P12107 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL11A1P12107 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.39□□□□□ -1.39
COL11A1P12107 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.39□□□□□ -1.39
COL11A1P12107 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.39□□□□□ -1.39
COL11A1P12107 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
COL11A1P12107 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.39□□□□□ -1.39
COL11A1P12107 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
COL11A1P12107 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.39□□□□□ -1.39
COL11A1P12107 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.39□□□□□ -1.39
COL11A1P12107 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
COL11A1P12107 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
COL11A1P12107 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
COL11A1P12107 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL11A1P12107 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.39□□□□□ -1.39
COL11A1P12107 AC005294.1-201ENST00000355509 281 ntBASIC6.39□□□□□ -1.39
COL11A1P12107 MIR585-201ENST00000384887 94 ntBASIC6.39□□□□□ -1.39
COL11A1P12107 FABP7P2-201ENST00000429946 379 ntBASIC6.39□□□□□ -1.39
COL11A1P12107 RPS27P18-201ENST00000431701 247 ntBASIC6.39□□□□□ -1.39
COL11A1P12107 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.39□□□□□ -1.39
COL11A1P12107 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.39□□□□□ -1.39
COL11A1P12107 FAR2P1-206ENST00000449736 709 ntBASIC6.39□□□□□ -1.39
COL11A1P12107 OTX2P1-201ENST00000450956 354 ntBASIC6.39□□□□□ -1.39
COL11A1P12107 RPS7P6-201ENST00000485777 579 ntBASIC6.39□□□□□ -1.39
COL11A1P12107 AC090638.1-201ENST00000498296 909 ntBASIC6.39□□□□□ -1.39
COL11A1P12107 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC6.39□□□□□ -1.39
COL11A1P12107 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.39□□□□□ -1.39
COL11A1P12107 BMPR1APS2-201ENST00000527904 1012 ntBASIC6.39□□□□□ -1.39
COL11A1P12107 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.39□□□□□ -1.39
COL11A1P12107 AC044860.2-201ENST00000561005 179 ntBASIC6.39□□□□□ -1.39
COL11A1P12107 AC069307.1-201ENST00000602820 447 ntBASIC6.39□□□□□ -1.39
COL11A1P12107 AC116651.1-201ENST00000609724 556 ntBASIC6.39□□□□□ -1.39
COL11A1P12107 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC6.39□□□□□ -1.39
COL11A1P12107 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
COL11A1P12107 AL596275.2-208ENST00000641192 594 ntBASIC6.39□□□□□ -1.39
COL11A1P12107 CASC19-264ENST00000641912 1184 ntBASIC6.39□□□□□ -1.39
COL11A1P12107 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.39□□□□□ -1.39
COL11A1P12107 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COL11A1P12107 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COL11A1P12107 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COL11A1P12107 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
COL11A1P12107 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL11A1P12107 MAPK10-304ENST00000641341 3984 ntBASIC6.38□□□□□ -1.39
COL11A1P12107 AP004607.3-201ENST00000530354 3915 ntBASIC6.38□□□□□ -1.39
COL11A1P12107 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL11A1P12107 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
COL11A1P12107 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL11A1P12107 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COL11A1P12107 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL11A1P12107 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
COL11A1P12107 RNA5SP443-201ENST00000363083 132 ntBASIC6.38□□□□□ -1.39
COL11A1P12107 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.38□□□□□ -1.39
COL11A1P12107 RNU1-106P-201ENST00000384382 164 ntBASIC6.38□□□□□ -1.39
COL11A1P12107 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.38□□□□□ -1.39
COL11A1P12107 RPL7L1P9-201ENST00000431298 745 ntBASIC6.38□□□□□ -1.39
COL11A1P12107 OSTCP1-201ENST00000455507 450 ntBASIC6.38□□□□□ -1.39
COL11A1P12107 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.38□□□□□ -1.39
COL11A1P12107 CBX1P5-201ENST00000475330 559 ntBASIC6.38□□□□□ -1.39
COL11A1P12107 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6.38□□□□□ -1.39
COL11A1P12107 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC6.38□□□□□ -1.39
COL11A1P12107 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.38□□□□□ -1.39
COL11A1P12107 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.38□□□□□ -1.39
COL11A1P12107 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC6.38□□□□□ -1.39
COL11A1P12107 FKBP1AP1-201ENST00000594588 318 ntBASIC6.38□□□□□ -1.39
COL11A1P12107 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.38□□□□□ -1.39
COL11A1P12107 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC6.38□□□□□ -1.39
COL11A1P12107 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL11A1P12107 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
COL11A1P12107 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COL11A1P12107 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL11A1P12107 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.38□□□□□ -1.39
COL11A1P12107 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC6.37□□□□□ -1.39
COL11A1P12107 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COL11A1P12107 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.37□□□□□ -1.39
COL11A1P12107 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
COL11A1P12107 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COL11A1P12107 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL11A1P12107 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
COL11A1P12107 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL11A1P12107 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
COL11A1P12107 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.37□□□□□ -1.39
COL11A1P12107 RPL23P2-201ENST00000320371 421 ntBASIC6.37□□□□□ -1.39
COL11A1P12107 MIR223-201ENST00000385204 110 ntBASIC6.37□□□□□ -1.39
COL11A1P12107 DUTP5-201ENST00000406790 469 ntBASIC6.37□□□□□ -1.39
COL11A1P12107 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC6.37□□□□□ -1.39
COL11A1P12107 RN7SKP99-201ENST00000517028 307 ntBASIC6.37□□□□□ -1.39
COL11A1P12107 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.37□□□□□ -1.39
COL11A1P12107 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC6.37□□□□□ -1.39
COL11A1P12107 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.37□□□□□ -1.39
COL11A1P12107 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.37□□□□□ -1.39
COL11A1P12107 AL133481.2-203ENST00000607558 139 ntBASIC6.37□□□□□ -1.39
COL11A1P12107 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
COL11A1P12107 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL11A1P12107 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL11A1P12107 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL11A1P12107 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COL11A1P12107 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL11A1P12107 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms