Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
TOP2AP11388 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
TOP2AP11388 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
TOP2AP11388 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC9.73□□□□□ -0.85
TOP2AP11388 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC9.73□□□□□ -0.85
TOP2AP11388 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
TOP2AP11388 RNVU1-6-201ENST00000364688 164 ntBASIC9.73□□□□□ -0.85
TOP2AP11388 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC9.73□□□□□ -0.85
TOP2AP11388 HMGB1P44-201ENST00000508597 572 ntBASIC9.73□□□□□ -0.85
TOP2AP11388 AC087385.3-201ENST00000620477 187 ntBASIC9.73□□□□□ -0.85
TOP2AP11388 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
TOP2AP11388 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
TOP2AP11388 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
TOP2AP11388 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
TOP2AP11388 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
TOP2AP11388 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
TOP2AP11388 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
TOP2AP11388 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC9.73□□□□□ -0.85
TOP2AP11388 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
TOP2AP11388 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
TOP2AP11388 AC114947.2-201ENST00000565748 2125 ntBASIC9.73□□□□□ -0.85
TOP2AP11388 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
TOP2AP11388 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
TOP2AP11388 ZNF840P-201ENST00000504759 1996 ntBASIC9.73□□□□□ -0.85
TOP2AP11388 ZNF733P-202ENST00000444809 1573 ntBASIC9.73□□□□□ -0.85
TOP2AP11388 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
TOP2AP11388 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
TOP2AP11388 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
TOP2AP11388 WBP11P1-201ENST00000562560 1931 ntBASIC9.72□□□□□ -0.85
TOP2AP11388 AL133388.1-201ENST00000404509 287 ntBASIC9.72□□□□□ -0.85
TOP2AP11388 RNA5SP251-201ENST00000410614 137 ntBASIC9.72□□□□□ -0.85
TOP2AP11388 RPSAP35-201ENST00000413753 818 ntBASIC9.72□□□□□ -0.85
TOP2AP11388 DNAJB5P1-201ENST00000454004 806 ntBASIC9.72□□□□□ -0.85
TOP2AP11388 AC108043.1-201ENST00000512696 574 ntBASIC9.72□□□□□ -0.85
TOP2AP11388 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC9.72□□□□□ -0.85
TOP2AP11388 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC9.72□□□□□ -0.85
TOP2AP11388 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC9.72□□□□□ -0.85
TOP2AP11388 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
TOP2AP11388 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC9.72□□□□□ -0.85
TOP2AP11388 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
TOP2AP11388 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
TOP2AP11388 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
TOP2AP11388 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
TOP2AP11388 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC9.72□□□□□ -0.85
TOP2AP11388 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
TOP2AP11388 GNAS-202ENST00000306090 477 ntTSL 5 BASIC9.72□□□□□ -0.85
TOP2AP11388 RN7SKP6-201ENST00000364795 319 ntBASIC9.72□□□□□ -0.85
TOP2AP11388 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC9.72□□□□□ -0.85
TOP2AP11388 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC9.72□□□□□ -0.85
TOP2AP11388 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC9.72□□□□□ -0.85
TOP2AP11388 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC9.72□□□□□ -0.85
TOP2AP11388 NANOGP9-201ENST00000439890 892 ntBASIC9.72□□□□□ -0.85
TOP2AP11388 CEACAMP7-201ENST00000444105 496 ntBASIC9.72□□□□□ -0.85
TOP2AP11388 Z80107.2-201ENST00000445127 392 ntBASIC9.72□□□□□ -0.85
TOP2AP11388 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC9.72□□□□□ -0.85
TOP2AP11388 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC9.72□□□□□ -0.85
TOP2AP11388 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC9.72□□□□□ -0.85
TOP2AP11388 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC9.72□□□□□ -0.85
TOP2AP11388 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC9.72□□□□□ -0.85
TOP2AP11388 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC9.71□□□□□ -0.85
TOP2AP11388 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC9.71□□□□□ -0.85
TOP2AP11388 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
TOP2AP11388 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
TOP2AP11388 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC9.71□□□□□ -0.86
TOP2AP11388 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
TOP2AP11388 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC9.71□□□□□ -0.86
TOP2AP11388 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
TOP2AP11388 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
TOP2AP11388 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
TOP2AP11388 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC9.71□□□□□ -0.86
TOP2AP11388 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC9.71□□□□□ -0.86
TOP2AP11388 RPS18P6-201ENST00000476880 458 ntBASIC9.71□□□□□ -0.86
TOP2AP11388 AC078899.1-201ENST00000521432 1185 ntBASIC9.71□□□□□ -0.86
TOP2AP11388 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC9.71□□□□□ -0.86
TOP2AP11388 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC9.71□□□□□ -0.86
TOP2AP11388 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC9.71□□□□□ -0.86
TOP2AP11388 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC9.71□□□□□ -0.86
TOP2AP11388 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC9.71□□□□□ -0.86
TOP2AP11388 HIRAP1-201ENST00000605318 787 ntBASIC9.71□□□□□ -0.86
TOP2AP11388 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC9.71□□□□□ -0.86
TOP2AP11388 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC9.71□□□□□ -0.86
TOP2AP11388 AC131971.1-201ENST00000332881 1482 ntBASIC9.71□□□□□ -0.86
TOP2AP11388 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
TOP2AP11388 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
TOP2AP11388 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
TOP2AP11388 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
TOP2AP11388 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
TOP2AP11388 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
TOP2AP11388 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
TOP2AP11388 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
TOP2AP11388 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
TOP2AP11388 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
TOP2AP11388 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
TOP2AP11388 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
TOP2AP11388 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC9.7□□□□□ -0.86
TOP2AP11388 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
TOP2AP11388 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC9.7□□□□□ -0.86
TOP2AP11388 RNU1-43P-201ENST00000365052 165 ntBASIC9.7□□□□□ -0.86
TOP2AP11388 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
TOP2AP11388 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms