Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL1A1P02452 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL1A1P02452 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.86□□□□□ -1.31
COL1A1P02452 RNU1-59P-201ENST00000364829 162 ntBASIC6.85□□□□□ -1.31
COL1A1P02452 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.85□□□□□ -1.31
COL1A1P02452 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC6.85□□□□□ -1.31
COL1A1P02452 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COL1A1P02452 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.85□□□□□ -1.31
COL1A1P02452 AL365220.1-201ENST00000432923 399 ntBASIC6.85□□□□□ -1.31
COL1A1P02452 RPL7P39-201ENST00000481157 744 ntBASIC6.85□□□□□ -1.31
COL1A1P02452 NDUFA5P12-201ENST00000503796 343 ntBASIC6.85□□□□□ -1.31
COL1A1P02452 AC074255.1-201ENST00000511259 501 ntBASIC6.85□□□□□ -1.31
COL1A1P02452 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.85□□□□□ -1.31
COL1A1P02452 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.85□□□□□ -1.31
COL1A1P02452 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.85□□□□□ -1.31
COL1A1P02452 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.85□□□□□ -1.31
COL1A1P02452 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.85□□□□□ -1.31
COL1A1P02452 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.85□□□□□ -1.31
COL1A1P02452 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.85□□□□□ -1.31
COL1A1P02452 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.85□□□□□ -1.31
COL1A1P02452 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
COL1A1P02452 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.85□□□□□ -1.31
COL1A1P02452 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.85□□□□□ -1.31
COL1A1P02452 AL121612.2-201ENST00000612261 482 ntBASIC6.85□□□□□ -1.31
COL1A1P02452 AL139407.1-201ENST00000613826 1175 ntBASIC6.85□□□□□ -1.31
COL1A1P02452 U1.25-201ENST00000614085 162 ntBASIC6.85□□□□□ -1.31
COL1A1P02452 U1.34-201ENST00000618578 162 ntBASIC6.85□□□□□ -1.31
COL1A1P02452 U1.31-201ENST00000620022 160 ntBASIC6.85□□□□□ -1.31
COL1A1P02452 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.85□□□□□ -1.31
COL1A1P02452 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COL1A1P02452 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
COL1A1P02452 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.85□□□□□ -1.31
COL1A1P02452 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.85□□□□□ -1.31
COL1A1P02452 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL1A1P02452 NBPF8-201ENST00000583271 5330 ntBASIC6.85□□□□□ -1.31
COL1A1P02452 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COL1A1P02452 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.85□□□□□ -1.31
COL1A1P02452 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
COL1A1P02452 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC6.85□□□□□ -1.31
COL1A1P02452 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.85□□□□□ -1.31
COL1A1P02452 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC6.85□□□□□ -1.31
COL1A1P02452 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL1A1P02452 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL1A1P02452 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.85□□□□□ -1.31
COL1A1P02452 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
COL1A1P02452 MIR223-201ENST00000385204 110 ntBASIC6.85□□□□□ -1.31
COL1A1P02452 AC136624.1-201ENST00000400791 413 ntBASIC6.85□□□□□ -1.31
COL1A1P02452 RN7SKP125-201ENST00000410481 302 ntBASIC6.85□□□□□ -1.31
COL1A1P02452 RN7SKP273-201ENST00000411392 314 ntBASIC6.85□□□□□ -1.31
COL1A1P02452 RPL23AP27-201ENST00000415161 451 ntBASIC6.85□□□□□ -1.31
COL1A1P02452 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.85□□□□□ -1.31
COL1A1P02452 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.85□□□□□ -1.31
COL1A1P02452 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.85□□□□□ -1.31
COL1A1P02452 EEF1B2P5-201ENST00000444820 548 ntBASIC6.85□□□□□ -1.31
COL1A1P02452 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.85□□□□□ -1.31
COL1A1P02452 OTX2P1-201ENST00000450956 354 ntBASIC6.85□□□□□ -1.31
COL1A1P02452 RN7SL860P-201ENST00000473738 223 ntBASIC6.85□□□□□ -1.31
COL1A1P02452 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.85□□□□□ -1.31
COL1A1P02452 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.85□□□□□ -1.31
COL1A1P02452 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL1A1P02452 AC136428.4-201ENST00000634254 1155 ntBASIC6.85□□□□□ -1.31
COL1A1P02452 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL1A1P02452 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
COL1A1P02452 MRRFP1-201ENST00000435941 1675 ntBASIC6.84□□□□□ -1.31
COL1A1P02452 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.84□□□□□ -1.31
COL1A1P02452 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.84□□□□□ -1.31
COL1A1P02452 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
COL1A1P02452 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.84□□□□□ -1.31
COL1A1P02452 PWAR1-201ENST00000624188 2414 ntBASIC6.84□□□□□ -1.31
COL1A1P02452 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL1A1P02452 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL1A1P02452 RNA5SP514-201ENST00000363717 111 ntBASIC6.84□□□□□ -1.31
COL1A1P02452 SLC35E1P1-201ENST00000419313 864 ntBASIC6.84□□□□□ -1.31
COL1A1P02452 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.84□□□□□ -1.31
COL1A1P02452 CYCSP12-201ENST00000437729 300 ntBASIC6.84□□□□□ -1.31
COL1A1P02452 OSTCP1-201ENST00000455507 450 ntBASIC6.84□□□□□ -1.31
COL1A1P02452 AC008953.1-201ENST00000497334 318 ntBASIC6.84□□□□□ -1.31
COL1A1P02452 AC078899.1-201ENST00000521432 1185 ntBASIC6.84□□□□□ -1.31
COL1A1P02452 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.84□□□□□ -1.31
COL1A1P02452 AL049779.2-201ENST00000553847 315 ntBASIC6.84□□□□□ -1.31
COL1A1P02452 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.84□□□□□ -1.31
COL1A1P02452 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
COL1A1P02452 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.32
COL1A1P02452 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
COL1A1P02452 ZNF101P1-201ENST00000435701 1720 ntBASIC6.84□□□□□ -1.32
COL1A1P02452 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
COL1A1P02452 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL1A1P02452 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL1A1P02452 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL1A1P02452 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL1A1P02452 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL1A1P02452 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL1A1P02452 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL1A1P02452 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
COL1A1P02452 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL1A1P02452 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
COL1A1P02452 RNA5SP319-201ENST00000362768 119 ntBASIC6.83□□□□□ -1.32
COL1A1P02452 RN7SKP28-201ENST00000364770 305 ntBASIC6.83□□□□□ -1.32
COL1A1P02452 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.83□□□□□ -1.32
COL1A1P02452 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms