Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 EIF3EP1-201ENST00000433978 1316 ntBASIC5.83□□□□□ -1.48
LDLRP01130 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LDLRP01130 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
LDLRP01130 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.83□□□□□ -1.48
LDLRP01130 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
LDLRP01130 SNORD16-201ENST00000362803 99 ntBASIC5.83□□□□□ -1.48
LDLRP01130 RNA5SP178-201ENST00000410380 128 ntBASIC5.83□□□□□ -1.48
LDLRP01130 RN7SKP108-201ENST00000411367 328 ntBASIC5.83□□□□□ -1.48
LDLRP01130 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.83□□□□□ -1.48
LDLRP01130 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.83□□□□□ -1.48
LDLRP01130 MARK2P12-201ENST00000420129 585 ntBASIC5.83□□□□□ -1.48
LDLRP01130 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LDLRP01130 AL157884.1-201ENST00000424561 454 ntBASIC5.83□□□□□ -1.48
LDLRP01130 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC5.83□□□□□ -1.48
LDLRP01130 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.83□□□□□ -1.48
LDLRP01130 AC073410.1-201ENST00000435125 589 ntBASIC5.83□□□□□ -1.48
LDLRP01130 GAPDHP48-201ENST00000436626 961 ntBASIC5.83□□□□□ -1.48
LDLRP01130 AC007998.1-201ENST00000474156 672 ntBASIC5.83□□□□□ -1.48
LDLRP01130 AC006539.1-201ENST00000481419 501 ntBASIC5.83□□□□□ -1.48
LDLRP01130 AC124945.1-201ENST00000485133 188 ntBASIC5.83□□□□□ -1.48
LDLRP01130 PPP1R11P1-201ENST00000486095 376 ntBASIC5.83□□□□□ -1.48
LDLRP01130 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.83□□□□□ -1.48
LDLRP01130 RNA5SP418-201ENST00000515951 117 ntBASIC5.83□□□□□ -1.48
LDLRP01130 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LDLRP01130 IGKV3D-25-201ENST00000519599 235 ntBASIC5.83□□□□□ -1.48
LDLRP01130 OR6M2P-201ENST00000529831 871 ntBASIC5.83□□□□□ -1.48
LDLRP01130 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.83□□□□□ -1.48
LDLRP01130 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.83□□□□□ -1.48
LDLRP01130 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.83□□□□□ -1.48
LDLRP01130 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.83□□□□□ -1.48
LDLRP01130 NPM1P5-201ENST00000557228 838 ntBASIC5.83□□□□□ -1.48
LDLRP01130 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.83□□□□□ -1.48
LDLRP01130 LINC00556-201ENST00000569603 412 ntBASIC5.83□□□□□ -1.48
LDLRP01130 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.83□□□□□ -1.48
LDLRP01130 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.83□□□□□ -1.48
LDLRP01130 BNIP3P7-201ENST00000605641 516 ntBASIC5.83□□□□□ -1.48
LDLRP01130 AC026790.2-201ENST00000606282 430 ntBASIC5.83□□□□□ -1.48
LDLRP01130 AC127024.6-201ENST00000621598 424 ntBASIC5.83□□□□□ -1.48
LDLRP01130 AC129778.1-202ENST00000623812 261 ntBASIC5.83□□□□□ -1.48
LDLRP01130 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.83□□□□□ -1.48
LDLRP01130 AL591379.1-207ENST00000635982 261 ntBASIC5.83□□□□□ -1.48
LDLRP01130 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.83□□□□□ -1.48
LDLRP01130 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC5.83□□□□□ -1.48
LDLRP01130 AC079776.5-201ENST00000641920 211 ntBASIC5.83□□□□□ -1.48
LDLRP01130 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LDLRP01130 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.83□□□□□ -1.48
LDLRP01130 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
LDLRP01130 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
LDLRP01130 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LDLRP01130 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.83□□□□□ -1.48
LDLRP01130 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
LDLRP01130 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.83□□□□□ -1.48
LDLRP01130 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LDLRP01130 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LDLRP01130 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.82□□□□□ -1.48
LDLRP01130 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.82□□□□□ -1.48
LDLRP01130 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
LDLRP01130 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.82□□□□□ -1.48
LDLRP01130 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LDLRP01130 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.82□□□□□ -1.48
LDLRP01130 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LDLRP01130 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LDLRP01130 AC091305.2-201ENST00000624049 1576 ntBASIC5.82□□□□□ -1.48
LDLRP01130 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.82□□□□□ -1.48
LDLRP01130 RNU4-23P-201ENST00000362839 140 ntBASIC5.82□□□□□ -1.48
LDLRP01130 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LDLRP01130 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LDLRP01130 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.82□□□□□ -1.48
LDLRP01130 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
LDLRP01130 AC013268.2-201ENST00000420753 337 ntBASIC5.82□□□□□ -1.48
LDLRP01130 MTND6P12-201ENST00000428247 522 ntBASIC5.82□□□□□ -1.48
LDLRP01130 MTCYBP14-201ENST00000457471 715 ntBASIC5.82□□□□□ -1.48
LDLRP01130 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.82□□□□□ -1.48
LDLRP01130 AGGF1P3-201ENST00000493675 1213 ntBASIC5.82□□□□□ -1.48
LDLRP01130 RN7SL284P-201ENST00000498823 275 ntBASIC5.82□□□□□ -1.48
LDLRP01130 PSMA2P2-201ENST00000504319 686 ntBASIC5.82□□□□□ -1.48
LDLRP01130 SNX18P24-201ENST00000505249 671 ntBASIC5.82□□□□□ -1.48
LDLRP01130 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LDLRP01130 ST13P12-201ENST00000508958 1094 ntBASIC5.82□□□□□ -1.48
LDLRP01130 AC010343.2-201ENST00000510162 224 ntBASIC5.82□□□□□ -1.48
LDLRP01130 SNORD46.2-201ENST00000516021 102 ntBASIC5.82□□□□□ -1.48
LDLRP01130 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.82□□□□□ -1.48
LDLRP01130 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.82□□□□□ -1.48
LDLRP01130 AC130364.2-201ENST00000528639 604 ntBASIC5.82□□□□□ -1.48
LDLRP01130 AC008055.1-201ENST00000547032 609 ntBASIC5.82□□□□□ -1.48
LDLRP01130 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.82□□□□□ -1.48
LDLRP01130 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LDLRP01130 AL049779.3-201ENST00000557141 606 ntBASIC5.82□□□□□ -1.48
LDLRP01130 AC116158.1-201ENST00000560231 2129 ntBASIC5.82□□□□□ -1.48
LDLRP01130 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.82□□□□□ -1.48
LDLRP01130 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.82□□□□□ -1.48
LDLRP01130 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.82□□□□□ -1.48
LDLRP01130 MIR4701-201ENST00000583094 63 ntBASIC5.82□□□□□ -1.48
LDLRP01130 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.82□□□□□ -1.48
LDLRP01130 AL021368.1-201ENST00000607490 540 ntBASIC5.82□□□□□ -1.48
LDLRP01130 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.82□□□□□ -1.48
LDLRP01130 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.82□□□□□ -1.48
LDLRP01130 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.82□□□□□ -1.48
LDLRP01130 AC018628.1-201ENST00000624147 3819 ntBASIC5.82□□□□□ -1.48
LDLRP01130 CR788268.1-201ENST00000603931 1809 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms