Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLPTM1O96005 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CLPTM1O96005 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
CLPTM1O96005 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.58□□□□□ -1.52
CLPTM1O96005 LINC00328-2P-201ENST00000436585 219 ntBASIC5.58□□□□□ -1.52
CLPTM1O96005 RPL12P18-201ENST00000437175 325 ntBASIC5.58□□□□□ -1.52
CLPTM1O96005 AC096632.2-201ENST00000438139 1239 ntBASIC5.58□□□□□ -1.52
CLPTM1O96005 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.58□□□□□ -1.52
CLPTM1O96005 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.58□□□□□ -1.52
CLPTM1O96005 RPS23P9-201ENST00000448848 438 ntBASIC5.58□□□□□ -1.52
CLPTM1O96005 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLPTM1O96005 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.58□□□□□ -1.52
CLPTM1O96005 RANP2-201ENST00000456833 229 ntBASIC5.58□□□□□ -1.52
CLPTM1O96005 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.58□□□□□ -1.52
CLPTM1O96005 RPL29P23-201ENST00000486188 442 ntBASIC5.58□□□□□ -1.52
CLPTM1O96005 EIF4E2P2-201ENST00000492033 736 ntBASIC5.58□□□□□ -1.52
CLPTM1O96005 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.58□□□□□ -1.52
CLPTM1O96005 AP001000.1-201ENST00000526843 742 ntBASIC5.58□□□□□ -1.52
CLPTM1O96005 RPL41P2-201ENST00000544920 409 ntBASIC5.58□□□□□ -1.52
CLPTM1O96005 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.58□□□□□ -1.52
CLPTM1O96005 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLPTM1O96005 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.58□□□□□ -1.52
CLPTM1O96005 AL163952.1-202ENST00000569625 600 ntBASIC5.58□□□□□ -1.52
CLPTM1O96005 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.58□□□□□ -1.52
CLPTM1O96005 AC008507.3-201ENST00000585753 472 ntBASIC5.58□□□□□ -1.52
CLPTM1O96005 AC063977.7-201ENST00000594454 337 ntBASIC5.58□□□□□ -1.52
CLPTM1O96005 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.58□□□□□ -1.52
CLPTM1O96005 AL589765.6-201ENST00000601909 549 ntBASIC5.58□□□□□ -1.52
CLPTM1O96005 AC019257.2-201ENST00000605539 497 ntBASIC5.58□□□□□ -1.52
CLPTM1O96005 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.58□□□□□ -1.52
CLPTM1O96005 AL021368.1-201ENST00000607490 540 ntBASIC5.58□□□□□ -1.52
CLPTM1O96005 AC073389.3-201ENST00000609434 935 ntBASIC5.58□□□□□ -1.52
CLPTM1O96005 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.58□□□□□ -1.52
CLPTM1O96005 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.58□□□□□ -1.52
CLPTM1O96005 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CLPTM1O96005 MIR7159-201ENST00000620587 66 ntBASIC5.58□□□□□ -1.52
CLPTM1O96005 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLPTM1O96005 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLPTM1O96005 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLPTM1O96005 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLPTM1O96005 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLPTM1O96005 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.58□□□□□ -1.52
CLPTM1O96005 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.58□□□□□ -1.52
CLPTM1O96005 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLPTM1O96005 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.58□□□□□ -1.52
CLPTM1O96005 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.57□□□□□ -1.52
CLPTM1O96005 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLPTM1O96005 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.57□□□□□ -1.52
CLPTM1O96005 MRRFP1-201ENST00000435941 1675 ntBASIC5.57□□□□□ -1.52
CLPTM1O96005 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.57□□□□□ -1.52
CLPTM1O96005 CR383656.5-201ENST00000547616 1340 ntBASIC5.57□□□□□ -1.52
CLPTM1O96005 AC233968.1-201ENST00000611212 1300 ntBASIC5.57□□□□□ -1.52
CLPTM1O96005 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLPTM1O96005 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.57□□□□□ -1.52
CLPTM1O96005 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLPTM1O96005 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLPTM1O96005 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLPTM1O96005 RNU6-249P-201ENST00000363016 102 ntBASIC5.57□□□□□ -1.52
CLPTM1O96005 U3.7-201ENST00000363668 216 ntBASIC5.57□□□□□ -1.52
CLPTM1O96005 AC245036.1-201ENST00000391727 309 ntBASIC5.57□□□□□ -1.52
CLPTM1O96005 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.57□□□□□ -1.52
CLPTM1O96005 PTCD2P2-201ENST00000415579 1095 ntBASIC5.57□□□□□ -1.52
CLPTM1O96005 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.57□□□□□ -1.52
CLPTM1O96005 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.57□□□□□ -1.52
CLPTM1O96005 AC083862.1-201ENST00000427378 1242 ntBASIC5.57□□□□□ -1.52
CLPTM1O96005 GTF3AP6-201ENST00000432585 986 ntBASIC5.57□□□□□ -1.52
CLPTM1O96005 UBE2V2P1-201ENST00000434717 398 ntBASIC5.57□□□□□ -1.52
CLPTM1O96005 AC242426.1-201ENST00000435270 960 ntBASIC5.57□□□□□ -1.52
CLPTM1O96005 ARMC4P1-201ENST00000438905 707 ntBASIC5.57□□□□□ -1.52
CLPTM1O96005 COX4I1P2-201ENST00000447446 547 ntBASIC5.57□□□□□ -1.52
CLPTM1O96005 OR52I1-201ENST00000450052 1050 ntBASIC5.57□□□□□ -1.52
CLPTM1O96005 NPM1P19-201ENST00000450070 712 ntBASIC5.57□□□□□ -1.52
CLPTM1O96005 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.57□□□□□ -1.52
CLPTM1O96005 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.57□□□□□ -1.52
CLPTM1O96005 AC018645.1-201ENST00000505003 109 ntBASIC5.57□□□□□ -1.52
CLPTM1O96005 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.57□□□□□ -1.52
CLPTM1O96005 AC078899.1-201ENST00000521432 1185 ntBASIC5.57□□□□□ -1.52
CLPTM1O96005 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.57□□□□□ -1.52
CLPTM1O96005 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.57□□□□□ -1.52
CLPTM1O96005 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.57□□□□□ -1.52
CLPTM1O96005 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC5.57□□□□□ -1.52
CLPTM1O96005 TDGP1-201ENST00000543961 1229 ntBASIC5.57□□□□□ -1.52
CLPTM1O96005 RPL3P13-201ENST00000550415 216 ntBASIC5.57□□□□□ -1.52
CLPTM1O96005 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLPTM1O96005 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.57□□□□□ -1.52
CLPTM1O96005 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.57□□□□□ -1.52
CLPTM1O96005 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.57□□□□□ -1.52
CLPTM1O96005 WBP1LP12-201ENST00000604449 331 ntBASIC5.57□□□□□ -1.52
CLPTM1O96005 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.57□□□□□ -1.52
CLPTM1O96005 MIR6889-201ENST00000613185 59 ntBASIC5.57□□□□□ -1.52
CLPTM1O96005 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.57□□□□□ -1.52
CLPTM1O96005 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.57□□□□□ -1.52
CLPTM1O96005 MIR6085-201ENST00000618314 110 ntBASIC5.57□□□□□ -1.52
CLPTM1O96005 SNX18P12-201ENST00000624821 759 ntBASIC5.57□□□□□ -1.52
CLPTM1O96005 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.57□□□□□ -1.52
CLPTM1O96005 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CLPTM1O96005 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.57□□□□□ -1.52
CLPTM1O96005 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLPTM1O96005 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CLPTM1O96005 AL353796.1-201ENST00000561542 3241 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms