Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC011487.3-201ENST00000593607 453 ntBASIC2.43□□□□□ -2.02
USH2AO75445 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC2.43□□□□□ -2.02
USH2AO75445 SSX9-202ENST00000608568 580 ntTSL 4 BASIC2.43□□□□□ -2.02
USH2AO75445 OR1D2-203ENST00000641833 4887 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
USH2AO75445 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC2.43□□□□□ -2.02
USH2AO75445 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
USH2AO75445 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
USH2AO75445 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
USH2AO75445 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
USH2AO75445 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC2.43□□□□□ -2.02
USH2AO75445 SRRM4-201ENST00000267260 8477 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
USH2AO75445 MYO18A-209ENST00000531253 7504 ntAPPRIS ALT1 TSL 5 BASIC2.43□□□□□ -2.02
USH2AO75445 MYO18A-223ENST00000628822 7501 ntAPPRIS ALT1 TSL 5 BASIC2.43□□□□□ -2.02
USH2AO75445 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
USH2AO75445 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC2.43□□□□□ -2.02
USH2AO75445 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
USH2AO75445 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
USH2AO75445 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC2.43□□□□□ -2.02
USH2AO75445 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
USH2AO75445 HIVEP3-201ENST00000372583 12193 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
USH2AO75445 NLRC5-201ENST00000262510 6822 ntAPPRIS P3 TSL 5 BASIC2.43□□□□□ -2.02
USH2AO75445 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC2.43□□□□□ -2.02
USH2AO75445 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
USH2AO75445 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
USH2AO75445 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
USH2AO75445 RNA5SP28-201ENST00000363841 119 ntBASIC2.43□□□□□ -2.02
USH2AO75445 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
USH2AO75445 AL590399.4-201ENST00000436561 601 ntBASIC2.43□□□□□ -2.02
USH2AO75445 AC005154.2-201ENST00000438110 379 ntBASIC2.43□□□□□ -2.02
USH2AO75445 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC2.43□□□□□ -2.02
USH2AO75445 KNOP1P3-201ENST00000446933 426 ntBASIC2.43□□□□□ -2.02
USH2AO75445 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC2.43□□□□□ -2.02
USH2AO75445 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC2.43□□□□□ -2.02
USH2AO75445 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC2.43□□□□□ -2.02
USH2AO75445 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC2.43□□□□□ -2.02
USH2AO75445 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC2.43□□□□□ -2.02
USH2AO75445 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC2.43□□□□□ -2.02
USH2AO75445 AC019193.2-201ENST00000610012 634 ntBASIC2.43□□□□□ -2.02
USH2AO75445 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC2.43□□□□□ -2.02
USH2AO75445 ZNRD1ASP-221ENST00000637794 1074 ntBASIC2.43□□□□□ -2.02
USH2AO75445 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC2.43□□□□□ -2.02
USH2AO75445 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
USH2AO75445 DPY19L1P1-201ENST00000417811 2594 ntBASIC2.43□□□□□ -2.02
USH2AO75445 CYB5R4-202ENST00000369681 9252 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
USH2AO75445 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
USH2AO75445 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC2.43□□□□□ -2.02
USH2AO75445 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC2.43□□□□□ -2.02
USH2AO75445 FRMPD2-201ENST00000305531 4665 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
USH2AO75445 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
USH2AO75445 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
USH2AO75445 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
USH2AO75445 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
USH2AO75445 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
USH2AO75445 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC2.43□□□□□ -2.02
USH2AO75445 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
USH2AO75445 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
USH2AO75445 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC2.43□□□□□ -2.02
USH2AO75445 AL445189.1-201ENST00000405722 338 ntBASIC2.43□□□□□ -2.02
USH2AO75445 CASKP1-201ENST00000412870 582 ntBASIC2.43□□□□□ -2.02
USH2AO75445 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC2.43□□□□□ -2.02
USH2AO75445 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC2.43□□□□□ -2.02
USH2AO75445 RPS23P2-201ENST00000463671 415 ntBASIC2.43□□□□□ -2.02
USH2AO75445 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC2.43□□□□□ -2.02
USH2AO75445 OR4A40P-201ENST00000533878 948 ntBASIC2.43□□□□□ -2.02
USH2AO75445 AC068993.1-201ENST00000546724 589 ntBASIC2.43□□□□□ -2.02
USH2AO75445 AC126615.2-201ENST00000553003 515 ntBASIC2.43□□□□□ -2.02
USH2AO75445 AC017100.2-201ENST00000584628 355 ntBASIC2.43□□□□□ -2.02
USH2AO75445 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC2.43□□□□□ -2.02
USH2AO75445 AC110048.2-201ENST00000617013 6721 ntBASIC2.43□□□□□ -2.02
USH2AO75445 AC144833.1-201ENST00000567953 4089 ntBASIC2.43□□□□□ -2.02
USH2AO75445 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC2.43□□□□□ -2.02
USH2AO75445 LPIN2-201ENST00000261596 6229 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
USH2AO75445 ESR1-207ENST00000440973 6466 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
USH2AO75445 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC2.43□□□□□ -2.02
USH2AO75445 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC2.43□□□□□ -2.02
USH2AO75445 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC2.43□□□□□ -2.02
USH2AO75445 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
USH2AO75445 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
USH2AO75445 AL034549.2-201ENST00000618285 3373 ntBASIC2.43□□□□□ -2.02
USH2AO75445 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
USH2AO75445 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
USH2AO75445 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
USH2AO75445 VAPB-204ENST00000475243 7936 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
USH2AO75445 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC2.43□□□□□ -2.02
USH2AO75445 ZNF969P-201ENST00000510345 2341 ntBASIC2.43□□□□□ -2.02
USH2AO75445 THAP12P4-201ENST00000528321 2266 ntBASIC2.43□□□□□ -2.02
USH2AO75445 RBM7-204ENST00000541475 6725 ntTSL 2 BASIC2.43□□□□□ -2.02
USH2AO75445 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC2.43□□□□□ -2.02
USH2AO75445 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
USH2AO75445 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
USH2AO75445 AL049697.2-201ENST00000403708 294 ntBASIC2.43□□□□□ -2.02
USH2AO75445 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC2.43□□□□□ -2.02
USH2AO75445 RN7SL165P-201ENST00000477476 291 ntBASIC2.43□□□□□ -2.02
USH2AO75445 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC2.43□□□□□ -2.02
USH2AO75445 AC091953.5-201ENST00000622919 233 ntBASIC2.43□□□□□ -2.02
USH2AO75445 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
USH2AO75445 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
USH2AO75445 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
USH2AO75445 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
USH2AO75445 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms