Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.77□□□□□ -1.49
SHOX2O60902 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.77□□□□□ -1.49
SHOX2O60902 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.77□□□□□ -1.49
SHOX2O60902 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.77□□□□□ -1.49
SHOX2O60902 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHOX2O60902 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHOX2O60902 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHOX2O60902 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHOX2O60902 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHOX2O60902 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.77□□□□□ -1.49
SHOX2O60902 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.77□□□□□ -1.49
SHOX2O60902 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.77□□□□□ -1.49
SHOX2O60902 TRIM51GP-201ENST00000534741 1350 ntBASIC5.77□□□□□ -1.49
SHOX2O60902 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHOX2O60902 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.77□□□□□ -1.49
SHOX2O60902 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHOX2O60902 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHOX2O60902 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHOX2O60902 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.76□□□□□ -1.49
SHOX2O60902 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
SHOX2O60902 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.76□□□□□ -1.49
SHOX2O60902 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.76□□□□□ -1.49
SHOX2O60902 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.76□□□□□ -1.49
SHOX2O60902 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
SHOX2O60902 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SHOX2O60902 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SHOX2O60902 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SHOX2O60902 UBBP2-201ENST00000376781 231 ntBASIC5.76□□□□□ -1.49
SHOX2O60902 EI24P3-201ENST00000399046 1062 ntBASIC5.76□□□□□ -1.49
SHOX2O60902 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
SHOX2O60902 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.76□□□□□ -1.49
SHOX2O60902 RNA5SP155-201ENST00000411154 129 ntBASIC5.76□□□□□ -1.49
SHOX2O60902 OR52N3P-201ENST00000413417 934 ntBASIC5.76□□□□□ -1.49
SHOX2O60902 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SHOX2O60902 EMC3-AS1-205ENST00000438698 534 ntBASIC5.76□□□□□ -1.49
SHOX2O60902 AC073465.2-201ENST00000440938 498 ntBASIC5.76□□□□□ -1.49
SHOX2O60902 HMGN1P32-201ENST00000441744 256 ntBASIC5.76□□□□□ -1.49
SHOX2O60902 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.76□□□□□ -1.49
SHOX2O60902 AC016027.4-201ENST00000450866 277 ntBASIC5.76□□□□□ -1.49
SHOX2O60902 AL133351.3-201ENST00000454998 193 ntBASIC5.76□□□□□ -1.49
SHOX2O60902 AL117692.1-201ENST00000494283 713 ntBASIC5.76□□□□□ -1.49
SHOX2O60902 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC5.76□□□□□ -1.49
SHOX2O60902 AC124891.1-201ENST00000536322 519 ntBASIC5.76□□□□□ -1.49
SHOX2O60902 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.76□□□□□ -1.49
SHOX2O60902 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
SHOX2O60902 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.76□□□□□ -1.49
SHOX2O60902 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC5.76□□□□□ -1.49
SHOX2O60902 DHFRP1-201ENST00000579682 559 ntBASIC5.76□□□□□ -1.49
SHOX2O60902 RN7SL32P-201ENST00000580514 281 ntBASIC5.76□□□□□ -1.49
SHOX2O60902 MIR4433B-201ENST00000581329 102 ntBASIC5.76□□□□□ -1.49
SHOX2O60902 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.76□□□□□ -1.49
SHOX2O60902 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.76□□□□□ -1.49
SHOX2O60902 OR7E19P-202ENST00000589942 844 ntBASIC5.76□□□□□ -1.49
SHOX2O60902 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.76□□□□□ -1.49
SHOX2O60902 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.76□□□□□ -1.49
SHOX2O60902 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.76□□□□□ -1.49
SHOX2O60902 U91328.4-201ENST00000608919 517 ntBASIC5.76□□□□□ -1.49
SHOX2O60902 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.76□□□□□ -1.49
SHOX2O60902 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SHOX2O60902 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.76□□□□□ -1.49
SHOX2O60902 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.76□□□□□ -1.49
SHOX2O60902 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
SHOX2O60902 SMG1P5-202ENST00000529428 4219 ntBASIC5.75□□□□□ -1.49
SHOX2O60902 SMG1P2-201ENST00000566127 4221 ntBASIC5.75□□□□□ -1.49
SHOX2O60902 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SHOX2O60902 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.75□□□□□ -1.49
SHOX2O60902 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SHOX2O60902 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.75□□□□□ -1.49
SHOX2O60902 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.75□□□□□ -1.49
SHOX2O60902 AC097063.1-201ENST00000426714 1797 ntBASIC5.75□□□□□ -1.49
SHOX2O60902 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
SHOX2O60902 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SHOX2O60902 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.75□□□□□ -1.49
SHOX2O60902 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SHOX2O60902 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHOX2O60902 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHOX2O60902 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SHOX2O60902 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHOX2O60902 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SHOX2O60902 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC5.75□□□□□ -1.49
SHOX2O60902 SNORA48.4-201ENST00000391089 134 ntBASIC5.75□□□□□ -1.49
SHOX2O60902 RPL10P10-201ENST00000403509 664 ntBASIC5.75□□□□□ -1.49
SHOX2O60902 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.75□□□□□ -1.49
SHOX2O60902 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
SHOX2O60902 RPL7AP49-201ENST00000429522 581 ntBASIC5.75□□□□□ -1.49
SHOX2O60902 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.75□□□□□ -1.49
SHOX2O60902 AL591438.1-201ENST00000433508 581 ntBASIC5.75□□□□□ -1.49
SHOX2O60902 BMS1P11-201ENST00000442351 885 ntBASIC5.75□□□□□ -1.49
SHOX2O60902 RPS7P3-201ENST00000443360 580 ntBASIC5.75□□□□□ -1.49
SHOX2O60902 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.75□□□□□ -1.49
SHOX2O60902 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHOX2O60902 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.75□□□□□ -1.49
SHOX2O60902 BMS1P9-201ENST00000457640 885 ntBASIC5.75□□□□□ -1.49
SHOX2O60902 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.75□□□□□ -1.49
SHOX2O60902 NREP-217ENST00000509025 987 ntTSL 3 BASIC5.75□□□□□ -1.49
SHOX2O60902 NREP-223ENST00000515855 801 ntTSL 4 BASIC5.75□□□□□ -1.49
SHOX2O60902 OR5D2P-201ENST00000524390 911 ntBASIC5.75□□□□□ -1.49
SHOX2O60902 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SHOX2O60902 AC008055.1-201ENST00000547032 609 ntBASIC5.75□□□□□ -1.49
SHOX2O60902 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms