Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC141002.1-201ENST00000607025 279 ntBASIC5.48□□□□□ -1.53
NPIPA2E9PIF3 MIR6793-201ENST00000612376 63 ntBASIC5.48□□□□□ -1.53
NPIPA2E9PIF3 AC103703.1-201ENST00000634783 663 ntBASIC5.48□□□□□ -1.53
NPIPA2E9PIF3 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NPIPA2E9PIF3 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.48□□□□□ -1.53
NPIPA2E9PIF3 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.48□□□□□ -1.53
NPIPA2E9PIF3 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NPIPA2E9PIF3 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NPIPA2E9PIF3 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
NPIPA2E9PIF3 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.48□□□□□ -1.53
NPIPA2E9PIF3 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
NPIPA2E9PIF3 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NPIPA2E9PIF3 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
NPIPA2E9PIF3 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NPIPA2E9PIF3 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
NPIPA2E9PIF3 LINC02019-201ENST00000608605 2060 ntBASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 OR52B3P-201ENST00000314715 928 ntBASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 TMSB4XP4-201ENST00000323496 618 ntBASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 RN7SKP81-201ENST00000365603 331 ntBASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 RNA5SP284-201ENST00000384547 118 ntBASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 AL451046.1-201ENST00000406097 534 ntBASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 SNRPEP6-201ENST00000407465 277 ntBASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 MTND4LP21-201ENST00000415303 295 ntBASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 MRPS21P2-201ENST00000424704 264 ntBASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 AC245884.2-201ENST00000426257 404 ntBASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 NDUFS5P5-201ENST00000437256 321 ntBASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 AC105420.1-201ENST00000504389 582 ntBASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 OR4A40P-201ENST00000533878 948 ntBASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 AC127024.6-201ENST00000621598 424 ntBASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
NPIPA2E9PIF3 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.46□□□□□ -1.53
NPIPA2E9PIF3 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
NPIPA2E9PIF3 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NPIPA2E9PIF3 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NPIPA2E9PIF3 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
NPIPA2E9PIF3 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
NPIPA2E9PIF3 SNORA17A-201ENST00000391185 133 ntBASIC5.46□□□□□ -1.54
NPIPA2E9PIF3 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.46□□□□□ -1.54
NPIPA2E9PIF3 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.46□□□□□ -1.54
NPIPA2E9PIF3 AC016027.5-201ENST00000427227 210 ntBASIC5.46□□□□□ -1.54
NPIPA2E9PIF3 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.46□□□□□ -1.54
NPIPA2E9PIF3 TUBB4BP6-201ENST00000437576 479 ntBASIC5.46□□□□□ -1.54
NPIPA2E9PIF3 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.46□□□□□ -1.54
NPIPA2E9PIF3 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.46□□□□□ -1.54
NPIPA2E9PIF3 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
NPIPA2E9PIF3 AL445466.1-201ENST00000448432 357 ntBASIC5.46□□□□□ -1.54
NPIPA2E9PIF3 RPL23AP60-201ENST00000450011 454 ntBASIC5.46□□□□□ -1.54
NPIPA2E9PIF3 AC016027.4-201ENST00000450866 277 ntBASIC5.46□□□□□ -1.54
NPIPA2E9PIF3 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.46□□□□□ -1.54
NPIPA2E9PIF3 AC011476.1-201ENST00000466725 307 ntBASIC5.46□□□□□ -1.54
NPIPA2E9PIF3 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.46□□□□□ -1.54
NPIPA2E9PIF3 AC114728.1-201ENST00000488289 483 ntBASIC5.46□□□□□ -1.54
NPIPA2E9PIF3 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.46□□□□□ -1.54
NPIPA2E9PIF3 RN7SKP248-201ENST00000516278 305 ntBASIC5.46□□□□□ -1.54
NPIPA2E9PIF3 OR56A7P-201ENST00000524865 941 ntBASIC5.46□□□□□ -1.54
NPIPA2E9PIF3 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.46□□□□□ -1.54
NPIPA2E9PIF3 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.46□□□□□ -1.54
NPIPA2E9PIF3 AC090651.1-201ENST00000567865 634 ntBASIC5.46□□□□□ -1.54
NPIPA2E9PIF3 RNU4ATAC-201ENST00000580972 127 ntBASIC5.46□□□□□ -1.54
NPIPA2E9PIF3 AC011445.2-201ENST00000599274 173 ntBASIC5.46□□□□□ -1.54
NPIPA2E9PIF3 RNU6-84P-201ENST00000607737 102 ntBASIC5.46□□□□□ -1.54
NPIPA2E9PIF3 AC096586.2-201ENST00000610260 441 ntBASIC5.46□□□□□ -1.54
NPIPA2E9PIF3 SNORA17.5-201ENST00000630429 132 ntBASIC5.46□□□□□ -1.54
NPIPA2E9PIF3 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.46□□□□□ -1.54
NPIPA2E9PIF3 AC093909.5-201ENST00000621839 1799 ntBASIC5.46□□□□□ -1.54
NPIPA2E9PIF3 AC068870.3-201ENST00000625077 2536 ntBASIC5.46□□□□□ -1.54
NPIPA2E9PIF3 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NPIPA2E9PIF3 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms