Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 MIR378H-201ENST00000579966 83 ntBASIC4.55□□□□□ -1.68
RBFOX3A6NFN3 MIR3936-201ENST00000584304 110 ntBASIC4.55□□□□□ -1.68
RBFOX3A6NFN3 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC4.55□□□□□ -1.68
RBFOX3A6NFN3 RPS11-205ENST00000599561 430 ntTSL 5 BASIC4.55□□□□□ -1.68
RBFOX3A6NFN3 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC4.55□□□□□ -1.68
RBFOX3A6NFN3 AC022106.1-201ENST00000612834 766 ntBASIC4.55□□□□□ -1.68
RBFOX3A6NFN3 AL035661.1-201ENST00000620459 1144 ntBASIC4.55□□□□□ -1.68
RBFOX3A6NFN3 AC091932.2-201ENST00000623014 291 ntBASIC4.55□□□□□ -1.68
RBFOX3A6NFN3 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC4.55□□□□□ -1.68
RBFOX3A6NFN3 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
RBFOX3A6NFN3 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RBFOX3A6NFN3 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RBFOX3A6NFN3 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RBFOX3A6NFN3 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.55□□□□□ -1.68
RBFOX3A6NFN3 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RBFOX3A6NFN3 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.55□□□□□ -1.68
RBFOX3A6NFN3 ING3-204ENST00000431467 1447 ntTSL 2 BASIC4.55□□□□□ -1.68
RBFOX3A6NFN3 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 HSPD1P7-201ENST00000447985 1686 ntBASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 AC025574.1-201ENST00000554784 1653 ntBASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 AC079097.1-201ENST00000512187 1399 ntBASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 RGS5-202ENST00000367903 934 ntTSL 3 BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 RN7SKP205-201ENST00000410999 307 ntBASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 AC099677.3-201ENST00000427081 395 ntBASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 GTF2IP14-201ENST00000441415 586 ntBASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 AC104164.1-201ENST00000460282 590 ntBASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 AC005165.2-201ENST00000466070 380 ntBASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 RPS7P11-201ENST00000484240 586 ntBASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 MYL12BP2-201ENST00000503948 512 ntBASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 RN7SKP196-201ENST00000516267 345 ntBASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 AC079064.1-201ENST00000528365 362 ntBASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 AP002004.1-206ENST00000532441 876 ntBASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 AC127381.1-201ENST00000555979 939 ntBASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 NIFKP4-201ENST00000567275 1192 ntBASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 RN7SL290P-201ENST00000578661 300 ntBASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 AC091059.2-201ENST00000623355 614 ntBASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 MBD5-221ENST00000637159 902 ntTSL 5 BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 AP004607.3-201ENST00000530354 3915 ntBASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
RBFOX3A6NFN3 AC104260.2-201ENST00000623551 3497 ntBASIC4.53□□□□□ -1.68
RBFOX3A6NFN3 EEF1A1P14-201ENST00000421195 1376 ntBASIC4.53□□□□□ -1.68
RBFOX3A6NFN3 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RBFOX3A6NFN3 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
RBFOX3A6NFN3 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RBFOX3A6NFN3 AC006206.1-201ENST00000544842 3387 ntBASIC4.53□□□□□ -1.68
RBFOX3A6NFN3 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RBFOX3A6NFN3 AC093909.5-201ENST00000621839 1799 ntBASIC4.53□□□□□ -1.68
RBFOX3A6NFN3 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC4.53□□□□□ -1.68
RBFOX3A6NFN3 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
RBFOX3A6NFN3 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RBFOX3A6NFN3 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
RBFOX3A6NFN3 PCAT14-202ENST00000627127 3935 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms