Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AC079905.1-201ENST00000549280 475 ntBASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 AL356801.1-201ENST00000559320 294 ntBASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 AGGF1P7-201ENST00000562369 913 ntBASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 MIR6806-201ENST00000622141 64 ntBASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 AL683826.1-201ENST00000624104 627 ntBASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 HSPD1P7-201ENST00000447985 1686 ntBASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRAV27A0A087WT01 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 ABCC13-202ENST00000463099 3842 ntBASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 AC109446.4-201ENST00000623235 2755 ntBASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 SNORA70.6-201ENST00000383934 134 ntBASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 VN1R110P-201ENST00000438988 971 ntBASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 AC023271.1-201ENST00000445936 1090 ntBASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 AC002075.1-201ENST00000457396 676 ntBASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 RN7SL197P-201ENST00000466981 299 ntBASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 AC074255.1-201ENST00000511259 501 ntBASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 AC002310.3-201ENST00000569728 723 ntBASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 MIR4260-201ENST00000583107 67 ntBASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 AC022919.1-201ENST00000624979 626 ntBASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 AC063952.1-203ENST00000634410 658 ntBASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRAV27A0A087WT01 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 AC007938.2-201ENST00000604666 2634 ntBASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 AC009962.1-201ENST00000567327 3813 ntBASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 AL159987.1-201ENST00000347911 293 ntBASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 RNA5SP273-201ENST00000362484 113 ntBASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 RN7SKP145-201ENST00000363291 303 ntBASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 RNA5SP431-201ENST00000410312 120 ntBASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 RPS6P23-201ENST00000413224 722 ntBASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 RPL5P2-201ENST00000429598 854 ntBASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 AC007679.3-201ENST00000434035 414 ntBASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 NDUFS5P5-201ENST00000437256 321 ntBASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 AC073610.1-201ENST00000489971 396 ntBASIC5.12□□□□□ -1.59
TRAV27A0A087WT01 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms