Protein–RNA interactions for Protein: Q9UHC1

MLH3, DNA mismatch repair protein Mlh3, humanhuman

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MLH3Q9UHC1 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC8.36□□□□□ -1.07
MLH3Q9UHC1 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
MLH3Q9UHC1 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
MLH3Q9UHC1 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
MLH3Q9UHC1 GDA-209ENST00000545168 5362 ntTSL 2 BASIC8.36□□□□□ -1.07
MLH3Q9UHC1 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
MLH3Q9UHC1 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
MLH3Q9UHC1 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC8.35□□□□□ -1.07
MLH3Q9UHC1 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
MLH3Q9UHC1 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
MLH3Q9UHC1 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
MLH3Q9UHC1 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
MLH3Q9UHC1 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
MLH3Q9UHC1 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
MLH3Q9UHC1 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC8.35□□□□□ -1.07
MLH3Q9UHC1 SNORA17.1-201ENST00000362945 126 ntBASIC8.35□□□□□ -1.07
MLH3Q9UHC1 RNU4-4P-201ENST00000364588 130 ntBASIC8.35□□□□□ -1.07
MLH3Q9UHC1 RAB28P1-201ENST00000411517 641 ntBASIC8.35□□□□□ -1.07
MLH3Q9UHC1 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC8.35□□□□□ -1.07
MLH3Q9UHC1 AL360081.1-201ENST00000428299 555 ntBASIC8.35□□□□□ -1.07
MLH3Q9UHC1 FAM96AP1-201ENST00000430879 482 ntBASIC8.35□□□□□ -1.07
MLH3Q9UHC1 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC8.35□□□□□ -1.07
MLH3Q9UHC1 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC8.35□□□□□ -1.07
MLH3Q9UHC1 RN7SL346P-201ENST00000491561 294 ntBASIC8.35□□□□□ -1.07
MLH3Q9UHC1 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC8.35□□□□□ -1.07
MLH3Q9UHC1 AC114947.2-201ENST00000565748 2125 ntBASIC8.35□□□□□ -1.07
MLH3Q9UHC1 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC8.35□□□□□ -1.07
MLH3Q9UHC1 AC012557.1-201ENST00000607115 611 ntBASIC8.35□□□□□ -1.07
MLH3Q9UHC1 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC8.35□□□□□ -1.07
MLH3Q9UHC1 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC8.35□□□□□ -1.07
MLH3Q9UHC1 CASC22-202ENST00000628396 802 ntTSL 5 BASIC8.35□□□□□ -1.07
MLH3Q9UHC1 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC8.35□□□□□ -1.07
MLH3Q9UHC1 AL034549.2-201ENST00000618285 3373 ntBASIC8.35□□□□□ -1.07
MLH3Q9UHC1 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC8.35□□□□□ -1.07
MLH3Q9UHC1 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC8.35□□□□□ -1.07
MLH3Q9UHC1 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
MLH3Q9UHC1 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
MLH3Q9UHC1 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
MLH3Q9UHC1 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC8.35□□□□□ -1.07
MLH3Q9UHC1 AL034546.1-201ENST00000623740 3693 ntBASIC8.35□□□□□ -1.07
MLH3Q9UHC1 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
MLH3Q9UHC1 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC8.35□□□□□ -1.07
MLH3Q9UHC1 AC002090.1-201ENST00000625000 2138 ntBASIC8.34□□□□□ -1.07
MLH3Q9UHC1 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
MLH3Q9UHC1 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
MLH3Q9UHC1 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
MLH3Q9UHC1 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
MLH3Q9UHC1 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC8.34□□□□□ -1.07
MLH3Q9UHC1 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
MLH3Q9UHC1 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
MLH3Q9UHC1 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC8.34□□□□□ -1.07
MLH3Q9UHC1 RNU1-43P-201ENST00000365052 165 ntBASIC8.34□□□□□ -1.07
MLH3Q9UHC1 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC8.34□□□□□ -1.07
MLH3Q9UHC1 PPP2R2DP1-201ENST00000420526 637 ntBASIC8.34□□□□□ -1.07
MLH3Q9UHC1 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC8.34□□□□□ -1.07
MLH3Q9UHC1 AC009220.1-201ENST00000451614 275 ntBASIC8.34□□□□□ -1.07
MLH3Q9UHC1 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC8.34□□□□□ -1.07
MLH3Q9UHC1 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC8.34□□□□□ -1.07
MLH3Q9UHC1 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC8.34□□□□□ -1.07
MLH3Q9UHC1 HMGB1P40-201ENST00000525121 540 ntBASIC8.34□□□□□ -1.07
MLH3Q9UHC1 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC8.34□□□□□ -1.07
MLH3Q9UHC1 AC127381.1-201ENST00000555979 939 ntBASIC8.34□□□□□ -1.07
MLH3Q9UHC1 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC8.34□□□□□ -1.07
MLH3Q9UHC1 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
MLH3Q9UHC1 PANDAR-201ENST00000629595 1506 ntBASIC8.34□□□□□ -1.07
MLH3Q9UHC1 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC8.34□□□□□ -1.07
MLH3Q9UHC1 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
MLH3Q9UHC1 OR55B1P-203ENST00000641518 2602 ntBASIC8.34□□□□□ -1.07
MLH3Q9UHC1 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
MLH3Q9UHC1 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC8.34□□□□□ -1.07
MLH3Q9UHC1 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
MLH3Q9UHC1 AL121768.1-201ENST00000613917 2544 ntBASIC8.34□□□□□ -1.07
MLH3Q9UHC1 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
MLH3Q9UHC1 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.08
MLH3Q9UHC1 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC8.34□□□□□ -1.08
MLH3Q9UHC1 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
MLH3Q9UHC1 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC8.33□□□□□ -1.08
MLH3Q9UHC1 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC8.33□□□□□ -1.08
MLH3Q9UHC1 AL133243.4-201ENST00000623116 3109 ntBASIC8.33□□□□□ -1.08
MLH3Q9UHC1 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
MLH3Q9UHC1 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC8.33□□□□□ -1.08
MLH3Q9UHC1 RN7SKP6-201ENST00000364795 319 ntBASIC8.33□□□□□ -1.08
MLH3Q9UHC1 TMA16P2-201ENST00000413187 601 ntBASIC8.33□□□□□ -1.08
MLH3Q9UHC1 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
MLH3Q9UHC1 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC8.33□□□□□ -1.08
MLH3Q9UHC1 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
MLH3Q9UHC1 GYG1P1-201ENST00000460864 698 ntBASIC8.33□□□□□ -1.08
MLH3Q9UHC1 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC8.33□□□□□ -1.08
MLH3Q9UHC1 AC139697.1-201ENST00000548429 745 ntBASIC8.33□□□□□ -1.08
MLH3Q9UHC1 DPPA3P2-202ENST00000557188 1219 ntBASIC8.33□□□□□ -1.08
MLH3Q9UHC1 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC8.33□□□□□ -1.08
MLH3Q9UHC1 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC8.33□□□□□ -1.08
MLH3Q9UHC1 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC8.33□□□□□ -1.08
MLH3Q9UHC1 AC095055.1-201ENST00000603472 1113 ntBASIC8.33□□□□□ -1.08
MLH3Q9UHC1 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
MLH3Q9UHC1 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC8.33□□□□□ -1.08
MLH3Q9UHC1 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
MLH3Q9UHC1 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC8.33□□□□□ -1.08
MLH3Q9UHC1 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC8.33□□□□□ -1.08
MLH3Q9UHC1 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms