Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.94□□□□□ -1.46
LRFN1Q9P244 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC5.94□□□□□ -1.46
LRFN1Q9P244 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.94□□□□□ -1.46
LRFN1Q9P244 NPIPB14P-203ENST00000532298 987 ntBASIC5.94□□□□□ -1.46
LRFN1Q9P244 OR4A6P-201ENST00000534364 970 ntBASIC5.94□□□□□ -1.46
LRFN1Q9P244 AC008055.1-201ENST00000547032 609 ntBASIC5.94□□□□□ -1.46
LRFN1Q9P244 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.94□□□□□ -1.46
LRFN1Q9P244 AL049870.4-201ENST00000555741 486 ntBASIC5.94□□□□□ -1.46
LRFN1Q9P244 AC026826.3-201ENST00000561747 158 ntBASIC5.94□□□□□ -1.46
LRFN1Q9P244 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.94□□□□□ -1.46
LRFN1Q9P244 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.94□□□□□ -1.46
LRFN1Q9P244 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC5.94□□□□□ -1.46
LRFN1Q9P244 AC079315.1-201ENST00000602952 623 ntBASIC5.94□□□□□ -1.46
LRFN1Q9P244 AL583832.1-201ENST00000603227 784 ntBASIC5.94□□□□□ -1.46
LRFN1Q9P244 CNTNAP3P1-201ENST00000616657 906 ntBASIC5.94□□□□□ -1.46
LRFN1Q9P244 AL445528.2-201ENST00000620582 470 ntBASIC5.94□□□□□ -1.46
LRFN1Q9P244 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC5.94□□□□□ -1.46
LRFN1Q9P244 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.94□□□□□ -1.46
LRFN1Q9P244 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.94□□□□□ -1.46
LRFN1Q9P244 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC5.94□□□□□ -1.46
LRFN1Q9P244 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC5.94□□□□□ -1.46
LRFN1Q9P244 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.94□□□□□ -1.46
LRFN1Q9P244 AC110597.1-201ENST00000562669 3176 ntBASIC5.94□□□□□ -1.46
LRFN1Q9P244 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC5.94□□□□□ -1.46
LRFN1Q9P244 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LRFN1Q9P244 MTND5P11-201ENST00000511037 1812 ntBASIC5.94□□□□□ -1.46
LRFN1Q9P244 AL442128.2-201ENST00000620246 1824 ntBASIC5.94□□□□□ -1.46
LRFN1Q9P244 AL596244.1-201ENST00000567068 3779 ntBASIC5.94□□□□□ -1.46
LRFN1Q9P244 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC5.94□□□□□ -1.46
LRFN1Q9P244 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
LRFN1Q9P244 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
LRFN1Q9P244 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LRFN1Q9P244 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LRFN1Q9P244 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
LRFN1Q9P244 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.93□□□□□ -1.46
LRFN1Q9P244 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC5.93□□□□□ -1.46
LRFN1Q9P244 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
LRFN1Q9P244 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
LRFN1Q9P244 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LRFN1Q9P244 ZNF733P-202ENST00000444809 1573 ntBASIC5.93□□□□□ -1.46
LRFN1Q9P244 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LRFN1Q9P244 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
LRFN1Q9P244 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LRFN1Q9P244 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.93□□□□□ -1.46
LRFN1Q9P244 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.93□□□□□ -1.46
LRFN1Q9P244 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LRFN1Q9P244 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.93□□□□□ -1.46
LRFN1Q9P244 CASC19-246ENST00000641625 1606 ntBASIC5.93□□□□□ -1.46
LRFN1Q9P244 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.93□□□□□ -1.46
LRFN1Q9P244 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
LRFN1Q9P244 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.93□□□□□ -1.46
LRFN1Q9P244 AC074141.1-201ENST00000588129 2995 ntBASIC5.93□□□□□ -1.46
LRFN1Q9P244 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LRFN1Q9P244 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
LRFN1Q9P244 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
LRFN1Q9P244 RNA5SP198-201ENST00000410376 127 ntBASIC5.93□□□□□ -1.46
LRFN1Q9P244 RN7SKP240-201ENST00000410583 375 ntBASIC5.93□□□□□ -1.46
LRFN1Q9P244 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC5.93□□□□□ -1.46
LRFN1Q9P244 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.93□□□□□ -1.46
LRFN1Q9P244 RPL23AP85-201ENST00000421838 433 ntBASIC5.93□□□□□ -1.46
LRFN1Q9P244 RPL7AP14-201ENST00000424041 802 ntBASIC5.93□□□□□ -1.46
LRFN1Q9P244 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.93□□□□□ -1.46
LRFN1Q9P244 AC115283.1-201ENST00000427353 400 ntBASIC5.93□□□□□ -1.46
LRFN1Q9P244 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.93□□□□□ -1.46
LRFN1Q9P244 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.93□□□□□ -1.46
LRFN1Q9P244 EMC3-AS1-205ENST00000438698 534 ntBASIC5.93□□□□□ -1.46
LRFN1Q9P244 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC5.93□□□□□ -1.46
LRFN1Q9P244 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LRFN1Q9P244 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC5.93□□□□□ -1.46
LRFN1Q9P244 AC037198.2-201ENST00000478845 733 ntBASIC5.93□□□□□ -1.46
LRFN1Q9P244 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LRFN1Q9P244 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LRFN1Q9P244 OR8X1P-201ENST00000534542 869 ntBASIC5.93□□□□□ -1.46
LRFN1Q9P244 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC5.93□□□□□ -1.46
LRFN1Q9P244 EEF1A1P17-201ENST00000547505 1275 ntBASIC5.93□□□□□ -1.46
LRFN1Q9P244 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.93□□□□□ -1.46
LRFN1Q9P244 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LRFN1Q9P244 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.93□□□□□ -1.46
LRFN1Q9P244 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC5.93□□□□□ -1.46
LRFN1Q9P244 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.93□□□□□ -1.46
LRFN1Q9P244 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.93□□□□□ -1.46
LRFN1Q9P244 AL157899.1-201ENST00000604110 936 ntBASIC5.93□□□□□ -1.46
LRFN1Q9P244 AC105148.1-201ENST00000604961 409 ntBASIC5.93□□□□□ -1.46
LRFN1Q9P244 AC025175.1-201ENST00000606482 759 ntBASIC5.93□□□□□ -1.46
LRFN1Q9P244 AC012557.1-201ENST00000607115 611 ntBASIC5.93□□□□□ -1.46
LRFN1Q9P244 AC015982.1-201ENST00000608113 465 ntBASIC5.93□□□□□ -1.46
LRFN1Q9P244 AL451049.1-201ENST00000608672 497 ntBASIC5.93□□□□□ -1.46
LRFN1Q9P244 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LRFN1Q9P244 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC5.93□□□□□ -1.46
LRFN1Q9P244 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.93□□□□□ -1.46
LRFN1Q9P244 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
LRFN1Q9P244 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LRFN1Q9P244 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LRFN1Q9P244 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LRFN1Q9P244 PABPC1P8-201ENST00000452851 2086 ntBASIC5.93□□□□□ -1.46
LRFN1Q9P244 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
LRFN1Q9P244 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LRFN1Q9P244 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LRFN1Q9P244 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
LRFN1Q9P244 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 870.6 ms