Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 RNA5SP326-201ENST00000363209 110 ntBASIC5.42□□□□□ -1.54
VAPAQ9P0L0 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
VAPAQ9P0L0 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.42□□□□□ -1.54
VAPAQ9P0L0 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
VAPAQ9P0L0 AC005042.1-201ENST00000393397 800 ntBASIC5.42□□□□□ -1.54
VAPAQ9P0L0 AC016739.1-201ENST00000405359 345 ntBASIC5.42□□□□□ -1.54
VAPAQ9P0L0 AC019205.1-201ENST00000421830 730 ntBASIC5.42□□□□□ -1.54
VAPAQ9P0L0 GAPDHP59-201ENST00000435908 267 ntBASIC5.42□□□□□ -1.54
VAPAQ9P0L0 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
VAPAQ9P0L0 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.42□□□□□ -1.54
VAPAQ9P0L0 SNORD125-201ENST00000459538 96 ntBASIC5.42□□□□□ -1.54
VAPAQ9P0L0 AC005017.1-201ENST00000482002 490 ntBASIC5.42□□□□□ -1.54
VAPAQ9P0L0 RPSAP51-201ENST00000497462 645 ntBASIC5.42□□□□□ -1.54
VAPAQ9P0L0 AC106822.1-201ENST00000502647 526 ntBASIC5.42□□□□□ -1.54
VAPAQ9P0L0 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.42□□□□□ -1.54
VAPAQ9P0L0 AL158068.1-201ENST00000506116 616 ntBASIC5.42□□□□□ -1.54
VAPAQ9P0L0 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.42□□□□□ -1.54
VAPAQ9P0L0 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.42□□□□□ -1.54
VAPAQ9P0L0 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.42□□□□□ -1.54
VAPAQ9P0L0 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.42□□□□□ -1.54
VAPAQ9P0L0 AC022001.1-201ENST00000605193 268 ntBASIC5.42□□□□□ -1.54
VAPAQ9P0L0 MIR6809-201ENST00000612189 116 ntBASIC5.42□□□□□ -1.54
VAPAQ9P0L0 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.42□□□□□ -1.54
VAPAQ9P0L0 AL137141.1-201ENST00000624622 4836 ntBASIC5.42□□□□□ -1.54
VAPAQ9P0L0 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VAPAQ9P0L0 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.42□□□□□ -1.54
VAPAQ9P0L0 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VAPAQ9P0L0 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.42□□□□□ -1.54
VAPAQ9P0L0 AC006206.1-201ENST00000544842 3387 ntBASIC5.42□□□□□ -1.54
VAPAQ9P0L0 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VAPAQ9P0L0 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
VAPAQ9P0L0 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VAPAQ9P0L0 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VAPAQ9P0L0 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.41□□□□□ -1.54
VAPAQ9P0L0 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.41□□□□□ -1.54
VAPAQ9P0L0 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VAPAQ9P0L0 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VAPAQ9P0L0 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VAPAQ9P0L0 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.41□□□□□ -1.54
VAPAQ9P0L0 SNORA70.6-201ENST00000383934 134 ntBASIC5.41□□□□□ -1.54
VAPAQ9P0L0 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
VAPAQ9P0L0 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VAPAQ9P0L0 AL354890.1-201ENST00000413730 346 ntBASIC5.41□□□□□ -1.54
VAPAQ9P0L0 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.41□□□□□ -1.54
VAPAQ9P0L0 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.41□□□□□ -1.54
VAPAQ9P0L0 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.41□□□□□ -1.54
VAPAQ9P0L0 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.41□□□□□ -1.54
VAPAQ9P0L0 RPSAP32-201ENST00000432681 526 ntBASIC5.41□□□□□ -1.54
VAPAQ9P0L0 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.41□□□□□ -1.54
VAPAQ9P0L0 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.41□□□□□ -1.54
VAPAQ9P0L0 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.41□□□□□ -1.54
VAPAQ9P0L0 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.41□□□□□ -1.54
VAPAQ9P0L0 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC5.41□□□□□ -1.54
VAPAQ9P0L0 AC093166.4-201ENST00000457867 318 ntBASIC5.41□□□□□ -1.54
VAPAQ9P0L0 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.41□□□□□ -1.54
VAPAQ9P0L0 SNRPCP11-201ENST00000492453 205 ntBASIC5.41□□□□□ -1.54
VAPAQ9P0L0 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC5.41□□□□□ -1.54
VAPAQ9P0L0 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.41□□□□□ -1.54
VAPAQ9P0L0 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.41□□□□□ -1.54
VAPAQ9P0L0 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.41□□□□□ -1.54
VAPAQ9P0L0 AP001000.1-201ENST00000526843 742 ntBASIC5.41□□□□□ -1.54
VAPAQ9P0L0 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.41□□□□□ -1.54
VAPAQ9P0L0 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.41□□□□□ -1.54
VAPAQ9P0L0 AC092332.1-201ENST00000563684 829 ntBASIC5.41□□□□□ -1.54
VAPAQ9P0L0 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.41□□□□□ -1.54
VAPAQ9P0L0 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VAPAQ9P0L0 AL136131.3-201ENST00000607600 188 ntBASIC5.41□□□□□ -1.54
VAPAQ9P0L0 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.41□□□□□ -1.54
VAPAQ9P0L0 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.41□□□□□ -1.54
VAPAQ9P0L0 AC004801.6-201ENST00000616571 978 ntBASIC5.41□□□□□ -1.54
VAPAQ9P0L0 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.41□□□□□ -1.54
VAPAQ9P0L0 AC005899.6-201ENST00000620729 297 ntBASIC5.41□□□□□ -1.54
VAPAQ9P0L0 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.41□□□□□ -1.54
VAPAQ9P0L0 AC068870.1-201ENST00000563737 2455 ntBASIC5.41□□□□□ -1.54
VAPAQ9P0L0 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.41□□□□□ -1.54
VAPAQ9P0L0 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
VAPAQ9P0L0 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VAPAQ9P0L0 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
VAPAQ9P0L0 AL132656.3-201ENST00000606384 1595 ntBASIC5.41□□□□□ -1.54
VAPAQ9P0L0 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VAPAQ9P0L0 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VAPAQ9P0L0 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VAPAQ9P0L0 BCORP1-203ENST00000513194 5093 ntBASIC5.41□□□□□ -1.54
VAPAQ9P0L0 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VAPAQ9P0L0 AC012078.1-201ENST00000405035 1646 ntBASIC5.41□□□□□ -1.54
VAPAQ9P0L0 AL354854.1-201ENST00000455940 1363 ntBASIC5.41□□□□□ -1.54
VAPAQ9P0L0 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VAPAQ9P0L0 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
VAPAQ9P0L0 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
VAPAQ9P0L0 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
VAPAQ9P0L0 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
VAPAQ9P0L0 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
VAPAQ9P0L0 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
VAPAQ9P0L0 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.4□□□□□ -1.54
VAPAQ9P0L0 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
VAPAQ9P0L0 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.4□□□□□ -1.54
VAPAQ9P0L0 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
VAPAQ9P0L0 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
VAPAQ9P0L0 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
VAPAQ9P0L0 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms