Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 MTCO1P18-201ENST00000455518 1419 ntBASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 MFSD8-220ENST00000641243 1422 ntBASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCM2LQ9NUG4 NCOA4P2-201ENST00000340589 1813 ntBASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 CASC19-281ENST00000642118 1554 ntBASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 AC117409.1-201ENST00000470499 1310 ntBASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 U6.112-201ENST00000384129 70 ntBASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 RNU4-31P-201ENST00000384211 141 ntBASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 MT-TP-201ENST00000387461 68 ntBASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 HMGB1P13-201ENST00000406019 642 ntBASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 MIR1266-201ENST00000408125 84 ntBASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 AC116036.1-201ENST00000412199 367 ntBASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 RPL12P28-201ENST00000430852 489 ntBASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 PUDPP2-201ENST00000431423 643 ntBASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 RPL12P11-201ENST00000439970 501 ntBASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 AC234771.4-201ENST00000441416 730 ntBASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 AC092685.1-201ENST00000447960 1243 ntBASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 AL451063.1-201ENST00000450164 1133 ntBASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 RPL7L1P3-201ENST00000455249 689 ntBASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 GTF2IP12-201ENST00000456547 356 ntBASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 RN7SL372P-201ENST00000461982 298 ntBASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 RN7SL350P-201ENST00000492591 299 ntBASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 MTND4LP2-201ENST00000502312 285 ntBASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 TECRP2-201ENST00000503270 928 ntBASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 HPRT1P1-201ENST00000509498 657 ntBASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 AC007537.1-201ENST00000539347 327 ntBASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 AC020914.7-201ENST00000594477 545 ntBASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 AC010435.1-201ENST00000623353 1177 ntBASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 AC019226.2-201ENST00000625973 424 ntBASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 AC004023.1-201ENST00000561473 1744 ntBASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCM2LQ9NUG4 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 AC119674.1-213ENST00000641177 1386 ntBASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 AL355578.1-201ENST00000607405 1328 ntBASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 AC062022.1-201ENST00000451026 1684 ntBASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 NXF4-202ENST00000416098 1465 ntBASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCM2LQ9NUG4 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms