Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 CASC19-222ENST00000641321 1173 ntBASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 AC110716.2-201ENST00000563865 3945 ntBASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 AC023245.2-201ENST00000530760 2978 ntBASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 FO082842.1-201ENST00000423552 1370 ntBASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 EEF1A1P9-201ENST00000514975 1383 ntBASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 AC092725.2-201ENST00000567658 1389 ntBASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 SELE-203ENST00000367775 3389 ntTSL 5 BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC7.19□□□□□ -1.26
PDLIM7Q9NR12 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 AC130360.2-201ENST00000533477 1556 ntBASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 TMSB4XP4-201ENST00000323496 618 ntBASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 MIR16-2-201ENST00000362117 81 ntBASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 RNU4-28P-201ENST00000364739 141 ntBASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 AL031779.1-201ENST00000415663 330 ntBASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 BX510359.3-201ENST00000422168 306 ntBASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 KCTD10P1-201ENST00000434203 625 ntBASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 AC092447.2-201ENST00000435487 669 ntBASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 MTND2P21-201ENST00000436242 1042 ntBASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 GAPDHP48-201ENST00000436626 961 ntBASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 ATP6V1E1P1-201ENST00000439215 681 ntBASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 SOCS5P1-201ENST00000440415 949 ntBASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 SNORA58-201ENST00000505219 137 ntBASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 PCNAP1-201ENST00000505363 709 ntBASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 AC010486.2-201ENST00000505572 483 ntBASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 AC112518.2-201ENST00000508565 425 ntBASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 AC010476.1-201ENST00000519111 851 ntBASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 AC092332.1-201ENST00000563684 829 ntBASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 MIR5095-201ENST00000578844 88 ntBASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 AC073046.2-201ENST00000604756 527 ntBASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 AC021851.1-201ENST00000608537 1082 ntBASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 AC011939.3-201ENST00000613686 466 ntBASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 AC022467.1-201ENST00000614738 749 ntBASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 AP003497.2-201ENST00000624220 967 ntBASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 MIR3974-201ENST00000637126 96 ntBASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 Z98755.1-201ENST00000407015 1384 ntBASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
PDLIM7Q9NR12 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC7.17□□□□□ -1.26
PDLIM7Q9NR12 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms