Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 RN7SKP279-201ENST00000411383 298 ntBASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 AC096644.3-201ENST00000416788 338 ntBASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 OSTCP4-201ENST00000424397 449 ntBASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 AL138479.1-201ENST00000426913 484 ntBASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 AL136231.1-201ENST00000429407 730 ntBASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 CXCR2P1-202ENST00000443392 1074 ntBASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 OR2L9P-201ENST00000444456 913 ntBASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 COX4I1P2-201ENST00000447446 547 ntBASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 AL929410.2-201ENST00000451170 189 ntBASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 SDC4P-201ENST00000453285 601 ntBASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 CBX1P2-201ENST00000453841 458 ntBASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 RNU1-88P-201ENST00000459274 128 ntBASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 RPL5P33-201ENST00000487833 905 ntBASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 NREP-217ENST00000509025 987 ntTSL 3 BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 NREP-223ENST00000515855 801 ntTSL 4 BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 AL121839.1-201ENST00000556233 1185 ntBASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 AC009962.1-201ENST00000567327 3813 ntBASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 AC067838.1-201ENST00000606064 577 ntBASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 MIR6133-201ENST00000617057 108 ntBASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 AL158062.1-201ENST00000619632 745 ntBASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 ATM-229ENST00000639953 587 ntTSL 5 BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC3.9□□□□□ -1.79
SND1-IT1Q9HBX3 AC125336.1-201ENST00000508893 2827 ntBASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 SMG1P4-204ENST00000523028 4131 ntBASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 CASC19-246ENST00000641625 1606 ntBASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 CRP-204ENST00000368112 787 ntTSL 2 BASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 AL672167.2-201ENST00000377164 879 ntBASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 GAPDHP15-201ENST00000398586 975 ntBASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 AL358178.1-201ENST00000407698 397 ntBASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 RNA5SP156-201ENST00000410250 110 ntBASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 RNGTTP1-201ENST00000420965 728 ntBASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 ELOBP4-201ENST00000423418 296 ntBASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 AL663074.2-201ENST00000440621 479 ntBASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 RPL5P25-201ENST00000441148 775 ntBASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 RN7SL655P-201ENST00000486087 298 ntBASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 AC083795.1-201ENST00000491760 320 ntBASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 AGGF1P3-201ENST00000493675 1213 ntBASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 RPSAP51-201ENST00000497462 645 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms