Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 SCARNA6-201ENST00000515982 265 ntBASIC5.88□□□□□ -1.47
SSBP3Q9BWW4 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC5.88□□□□□ -1.47
SSBP3Q9BWW4 NDUFA5P2-201ENST00000519723 344 ntBASIC5.88□□□□□ -1.47
SSBP3Q9BWW4 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC5.88□□□□□ -1.47
SSBP3Q9BWW4 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC5.88□□□□□ -1.47
SSBP3Q9BWW4 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC5.88□□□□□ -1.47
SSBP3Q9BWW4 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.88□□□□□ -1.47
SSBP3Q9BWW4 AL359715.3-201ENST00000569267 2123 ntBASIC5.88□□□□□ -1.47
SSBP3Q9BWW4 MIR4789-201ENST00000577469 82 ntBASIC5.88□□□□□ -1.47
SSBP3Q9BWW4 MIR3135A-201ENST00000578460 77 ntBASIC5.88□□□□□ -1.47
SSBP3Q9BWW4 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.88□□□□□ -1.47
SSBP3Q9BWW4 AC015688.2-201ENST00000584523 262 ntBASIC5.88□□□□□ -1.47
SSBP3Q9BWW4 MIR5682-201ENST00000584864 76 ntBASIC5.88□□□□□ -1.47
SSBP3Q9BWW4 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC5.88□□□□□ -1.47
SSBP3Q9BWW4 AC022146.1-201ENST00000595307 847 ntBASIC5.88□□□□□ -1.47
SSBP3Q9BWW4 VN1R83P-201ENST00000595685 445 ntBASIC5.88□□□□□ -1.47
SSBP3Q9BWW4 AC005377.1-201ENST00000605126 456 ntBASIC5.88□□□□□ -1.47
SSBP3Q9BWW4 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SSBP3Q9BWW4 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
SSBP3Q9BWW4 AC016769.4-201ENST00000616893 535 ntBASIC5.88□□□□□ -1.47
SSBP3Q9BWW4 AC005753.1-201ENST00000623837 618 ntBASIC5.88□□□□□ -1.47
SSBP3Q9BWW4 OR1S1-201ENST00000624470 978 ntBASIC5.88□□□□□ -1.47
SSBP3Q9BWW4 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SSBP3Q9BWW4 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC5.88□□□□□ -1.47
SSBP3Q9BWW4 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.88□□□□□ -1.47
SSBP3Q9BWW4 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SSBP3Q9BWW4 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
SSBP3Q9BWW4 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.88□□□□□ -1.47
SSBP3Q9BWW4 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC5.88□□□□□ -1.47
SSBP3Q9BWW4 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.88□□□□□ -1.47
SSBP3Q9BWW4 SLC2A3P4-201ENST00000521259 1471 ntBASIC5.88□□□□□ -1.47
SSBP3Q9BWW4 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SSBP3Q9BWW4 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
SSBP3Q9BWW4 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SSBP3Q9BWW4 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC5.88□□□□□ -1.47
SSBP3Q9BWW4 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
SSBP3Q9BWW4 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC5.88□□□□□ -1.47
SSBP3Q9BWW4 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SSBP3Q9BWW4 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SSBP3Q9BWW4 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SSBP3Q9BWW4 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
SSBP3Q9BWW4 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.88□□□□□ -1.47
SSBP3Q9BWW4 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SSBP3Q9BWW4 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 AL021877.2-201ENST00000624442 10684 ntBASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 RNFT1P3-201ENST00000340898 1052 ntBASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 RN7SKP107-201ENST00000364157 290 ntBASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 Y_RNA.560-201ENST00000384689 102 ntBASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 RSL24D1P4-201ENST00000400938 484 ntBASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 EEF1GP6-201ENST00000402309 905 ntBASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 MTCO1P17-201ENST00000411522 491 ntBASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 AL513325.1-201ENST00000417716 1034 ntBASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 AC098592.1-201ENST00000419352 333 ntBASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 YWHAZP5-201ENST00000419975 730 ntBASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 EIF4A1P1-201ENST00000420241 934 ntBASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 IPMKP1-201ENST00000425988 855 ntBASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 HIGD1AP12-201ENST00000427832 281 ntBASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 NDUFS5P5-201ENST00000437256 321 ntBASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 SDHCP3-201ENST00000445371 506 ntBASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 PRDX1P1-201ENST00000449329 596 ntBASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 AL096803.2-201ENST00000450032 677 ntBASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 RHEBP2-201ENST00000450289 600 ntBASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 AC009244.1-201ENST00000450566 258 ntBASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 TPMTP4-201ENST00000450749 678 ntBASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 MTND2P24-201ENST00000453434 806 ntBASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 RPL7P32-201ENST00000457119 744 ntBASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 GAPDHP53-201ENST00000458397 924 ntBASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 RNU6-956P-201ENST00000458868 103 ntBASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 AL603882.1-201ENST00000463059 681 ntBASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 RPL30P6-201ENST00000475925 342 ntBASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 AC138853.1-201ENST00000503549 823 ntBASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 OXR1-212ENST00000521592 993 ntTSL 5 BASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 FCF1-203ENST00000553615 954 ntTSL 3 BASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 MRPS21P9-201ENST00000571150 257 ntBASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC5.87□□□□□ -1.47
SSBP3Q9BWW4 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms