Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RPAP1Q9BWH6 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RPAP1Q9BWH6 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RPAP1Q9BWH6 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
RPAP1Q9BWH6 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC7.1□□□□□ -1.27
RPAP1Q9BWH6 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
RPAP1Q9BWH6 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC7.09□□□□□ -1.27
RPAP1Q9BWH6 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RPAP1Q9BWH6 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RPAP1Q9BWH6 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RPAP1Q9BWH6 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
RPAP1Q9BWH6 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC7.09□□□□□ -1.27
RPAP1Q9BWH6 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RPAP1Q9BWH6 RPS4XP5-201ENST00000419038 768 ntBASIC7.09□□□□□ -1.27
RPAP1Q9BWH6 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC7.09□□□□□ -1.27
RPAP1Q9BWH6 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC7.09□□□□□ -1.27
RPAP1Q9BWH6 AC073909.1-201ENST00000447112 999 ntBASIC7.09□□□□□ -1.27
RPAP1Q9BWH6 ACA64.4-201ENST00000459070 127 ntBASIC7.09□□□□□ -1.27
RPAP1Q9BWH6 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC7.09□□□□□ -1.27
RPAP1Q9BWH6 RN7SL57P-201ENST00000493687 290 ntBASIC7.09□□□□□ -1.27
RPAP1Q9BWH6 GAPDHP71-201ENST00000511530 1003 ntBASIC7.09□□□□□ -1.27
RPAP1Q9BWH6 RN7SKP288-201ENST00000516227 268 ntBASIC7.09□□□□□ -1.27
RPAP1Q9BWH6 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
RPAP1Q9BWH6 AL589674.2-201ENST00000604304 337 ntBASIC7.09□□□□□ -1.27
RPAP1Q9BWH6 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RPAP1Q9BWH6 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC7.09□□□□□ -1.27
RPAP1Q9BWH6 MAPK10-350ENST00000641777 965 ntBASIC7.09□□□□□ -1.27
RPAP1Q9BWH6 AC079776.5-201ENST00000641920 211 ntBASIC7.09□□□□□ -1.27
RPAP1Q9BWH6 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
RPAP1Q9BWH6 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
RPAP1Q9BWH6 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
RPAP1Q9BWH6 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC7.09□□□□□ -1.27
RPAP1Q9BWH6 AC007114.2-201ENST00000576014 4281 ntBASIC7.09□□□□□ -1.27
RPAP1Q9BWH6 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RPAP1Q9BWH6 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RPAP1Q9BWH6 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC7.09□□□□□ -1.27
RPAP1Q9BWH6 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC7.09□□□□□ -1.27
RPAP1Q9BWH6 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
RPAP1Q9BWH6 YES1-203ENST00000577961 4554 ntTSL 5 BASIC7.09□□□□□ -1.28
RPAP1Q9BWH6 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 SNRPEP6-201ENST00000407465 277 ntBASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 RN7SKP278-201ENST00000410504 342 ntBASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 YWHAEP1-201ENST00000453697 763 ntBASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 AC002075.1-201ENST00000457396 676 ntBASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 AC093166.4-201ENST00000457867 318 ntBASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 RPS23P6-201ENST00000466136 431 ntBASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 RPS17P15-201ENST00000475609 349 ntBASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 PPP1R11P1-201ENST00000486095 376 ntBASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 RN7SL466P-201ENST00000497546 295 ntBASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 AC138866.2-201ENST00000508650 584 ntBASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 ST13P12-201ENST00000508958 1094 ntBASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 AC016180.1-201ENST00000567945 403 ntBASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 AL049840.6-201ENST00000604583 345 ntBASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 AL139099.4-201ENST00000614802 114 ntBASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 RN7SL544P-201ENST00000617232 284 ntBASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 AL445670.1-201ENST00000618889 801 ntBASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 RN7SL763P-201ENST00000620922 284 ntBASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 AL359955.1-201ENST00000455242 3275 ntBASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 SAMMSON-210ENST00000641260 1308 ntBASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 AL596448.1-201ENST00000415024 392 ntBASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 EIF4A1P6-201ENST00000448133 1210 ntBASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 AC090424.1-201ENST00000535243 736 ntBASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
RPAP1Q9BWH6 AC233699.1-201ENST00000569955 1168 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms