Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC233702.11-201ENST00000598588 333 ntBASIC7.67□□□□□ -1.18
USB1Q9BQ65 AC012065.3-201ENST00000602736 439 ntBASIC7.67□□□□□ -1.18
USB1Q9BQ65 C1orf186-208ENST00000603378 614 ntTSL 3 BASIC7.67□□□□□ -1.18
USB1Q9BQ65 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC7.67□□□□□ -1.18
USB1Q9BQ65 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC7.67□□□□□ -1.18
USB1Q9BQ65 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC7.67□□□□□ -1.18
USB1Q9BQ65 AC233309.1-201ENST00000619522 751 ntBASIC7.67□□□□□ -1.18
USB1Q9BQ65 AC091925.1-201ENST00000623204 462 ntBASIC7.67□□□□□ -1.18
USB1Q9BQ65 AC090617.10-201ENST00000624308 134 ntBASIC7.67□□□□□ -1.18
USB1Q9BQ65 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC7.67□□□□□ -1.18
USB1Q9BQ65 AC104619.3-201ENST00000509116 1387 ntBASIC7.67□□□□□ -1.18
USB1Q9BQ65 MTND4P35-201ENST00000604257 1375 ntBASIC7.67□□□□□ -1.18
USB1Q9BQ65 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
USB1Q9BQ65 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
USB1Q9BQ65 CEACAM20-202ENST00000614577 1530 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
USB1Q9BQ65 GPC3-204ENST00000631057 1581 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
USB1Q9BQ65 AC091046.3-201ENST00000631455 1574 ntBASIC7.67□□□□□ -1.18
USB1Q9BQ65 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
USB1Q9BQ65 RBBP4-206ENST00000458695 1674 ntTSL 2 BASIC7.67□□□□□ -1.18
USB1Q9BQ65 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC7.66□□□□□ -1.18
USB1Q9BQ65 TFIP11-217ENST00000619735 3402 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
USB1Q9BQ65 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
USB1Q9BQ65 MAGOHB-201ENST00000320756 2623 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
USB1Q9BQ65 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
USB1Q9BQ65 ZNF2-204ENST00000617923 3885 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
USB1Q9BQ65 TULP3-201ENST00000397132 1951 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
USB1Q9BQ65 AL731563.3-201ENST00000608005 3005 ntTSL 2 BASIC7.66□□□□□ -1.18
USB1Q9BQ65 CASP10-201ENST00000272879 2073 ntTSL 2 BASIC7.66□□□□□ -1.18
USB1Q9BQ65 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
USB1Q9BQ65 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
USB1Q9BQ65 MELK-211ENST00000545008 2236 ntTSL 2 BASIC7.66□□□□□ -1.18
USB1Q9BQ65 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
USB1Q9BQ65 MAPT-AS1-204ENST00000634876 3602 ntTSL 5 BASIC7.66□□□□□ -1.18
USB1Q9BQ65 LRRC37A-202ENST00000393465 4997 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
USB1Q9BQ65 TFF1-201ENST00000291527 551 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
USB1Q9BQ65 RNA5SP145-201ENST00000363124 125 ntBASIC7.66□□□□□ -1.18
USB1Q9BQ65 RN7SKP93-201ENST00000363838 309 ntBASIC7.66□□□□□ -1.18
USB1Q9BQ65 AL035467.1-201ENST00000403583 686 ntBASIC7.66□□□□□ -1.18
USB1Q9BQ65 AL603908.1-201ENST00000406098 201 ntBASIC7.66□□□□□ -1.18
USB1Q9BQ65 MIR320C1-201ENST00000408566 88 ntBASIC7.66□□□□□ -1.18
USB1Q9BQ65 MIR1303-201ENST00000408625 86 ntBASIC7.66□□□□□ -1.18
USB1Q9BQ65 RN7SKP240-201ENST00000410583 375 ntBASIC7.66□□□□□ -1.18
USB1Q9BQ65 AL136981.1-201ENST00000411450 549 ntTSL 4 BASIC7.66□□□□□ -1.18
USB1Q9BQ65 AC127391.1-201ENST00000411737 98 ntBASIC7.66□□□□□ -1.18
USB1Q9BQ65 NPM1P40-201ENST00000412758 733 ntBASIC7.66□□□□□ -1.18
USB1Q9BQ65 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC7.66□□□□□ -1.18
USB1Q9BQ65 OR2L6P-201ENST00000416377 940 ntBASIC7.66□□□□□ -1.18
USB1Q9BQ65 AC128709.3-201ENST00000420213 626 ntTSL 4 BASIC7.66□□□□□ -1.18
USB1Q9BQ65 BEND7P1-201ENST00000422058 457 ntBASIC7.66□□□□□ -1.18
USB1Q9BQ65 SETP9-201ENST00000423837 832 ntBASIC7.66□□□□□ -1.18
USB1Q9BQ65 RPSAP10-201ENST00000426103 878 ntBASIC7.66□□□□□ -1.18
USB1Q9BQ65 AL139220.2-213ENST00000431800 674 ntTSL 3 BASIC7.66□□□□□ -1.18
USB1Q9BQ65 RPL12P15-201ENST00000433385 499 ntBASIC7.66□□□□□ -1.18
USB1Q9BQ65 AL441963.1-201ENST00000435137 792 ntBASIC7.66□□□□□ -1.18
USB1Q9BQ65 AL731567.1-201ENST00000435635 462 ntTSL 2 BASIC7.66□□□□□ -1.18
USB1Q9BQ65 AC105942.1-202ENST00000438509 952 ntTSL 3 BASIC7.66□□□□□ -1.18
USB1Q9BQ65 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC7.66□□□□□ -1.18
USB1Q9BQ65 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC7.66□□□□□ -1.18
USB1Q9BQ65 AC103563.4-201ENST00000454384 368 ntBASIC7.66□□□□□ -1.18
USB1Q9BQ65 LINC01883-201ENST00000457385 380 ntTSL 2 BASIC7.66□□□□□ -1.18
USB1Q9BQ65 NF1P3-201ENST00000457709 450 ntBASIC7.66□□□□□ -1.18
USB1Q9BQ65 PRKAG2-AS1-201ENST00000464464 382 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
USB1Q9BQ65 SLC17A1-203ENST00000468082 1242 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
USB1Q9BQ65 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
USB1Q9BQ65 CTLA4-204ENST00000472206 277 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
USB1Q9BQ65 RN7SL448P-201ENST00000475566 295 ntBASIC7.66□□□□□ -1.18
USB1Q9BQ65 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC7.66□□□□□ -1.18
USB1Q9BQ65 HNRNPA1P20-201ENST00000484852 955 ntBASIC7.66□□□□□ -1.18
USB1Q9BQ65 AC013356.1-201ENST00000489027 564 ntBASIC7.66□□□□□ -1.18
USB1Q9BQ65 RPL23AP66-201ENST00000494341 479 ntBASIC7.66□□□□□ -1.18
USB1Q9BQ65 CC2D2A-205ENST00000503658 605 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
USB1Q9BQ65 GNGT2-203ENST00000507680 585 ntAPPRIS P1 TSL 4 BASIC7.66□□□□□ -1.18
USB1Q9BQ65 KLHL2P1-201ENST00000508691 521 ntBASIC7.66□□□□□ -1.18
USB1Q9BQ65 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC7.66□□□□□ -1.18
USB1Q9BQ65 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC7.66□□□□□ -1.18
USB1Q9BQ65 GNGT2-206ENST00000515635 783 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
USB1Q9BQ65 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC7.66□□□□□ -1.18
USB1Q9BQ65 IGHV3-63-201ENST00000518422 341 ntBASIC7.66□□□□□ -1.18
USB1Q9BQ65 PRB4-203ENST00000535904 796 ntAPPRIS P3 TSL 2 BASIC7.66□□□□□ -1.18
USB1Q9BQ65 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC7.66□□□□□ -1.18
USB1Q9BQ65 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC7.66□□□□□ -1.18
USB1Q9BQ65 AC120498.4-201ENST00000561649 320 ntTSL 3 BASIC7.66□□□□□ -1.18
USB1Q9BQ65 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC7.66□□□□□ -1.18
USB1Q9BQ65 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC7.66□□□□□ -1.18
USB1Q9BQ65 AC093249.5-201ENST00000568120 430 ntBASIC7.66□□□□□ -1.18
USB1Q9BQ65 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC7.66□□□□□ -1.18
USB1Q9BQ65 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC7.66□□□□□ -1.18
USB1Q9BQ65 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC7.66□□□□□ -1.18
USB1Q9BQ65 ZNF286A-214ENST00000581529 560 ntTSL 4 BASIC7.66□□□□□ -1.18
USB1Q9BQ65 FAM106CP-201ENST00000582212 507 ntBASIC7.66□□□□□ -1.18
USB1Q9BQ65 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC7.66□□□□□ -1.18
USB1Q9BQ65 AC004221.1-201ENST00000592843 844 ntTSL 5 BASIC7.66□□□□□ -1.18
USB1Q9BQ65 AC080078.3-201ENST00000605407 463 ntBASIC7.66□□□□□ -1.18
USB1Q9BQ65 AL080274.1-201ENST00000605565 220 ntBASIC7.66□□□□□ -1.18
USB1Q9BQ65 GNAS-AS1_2.1-201ENST00000613404 114 ntBASIC7.66□□□□□ -1.18
USB1Q9BQ65 AL133173.2-201ENST00000614270 90 ntBASIC7.66□□□□□ -1.18
USB1Q9BQ65 AC018558.4-201ENST00000622153 281 ntBASIC7.66□□□□□ -1.18
USB1Q9BQ65 AC099654.6-201ENST00000636487 512 ntBASIC7.66□□□□□ -1.18
USB1Q9BQ65 KRT7-214ENST00000638501 398 ntTSL 5 BASIC7.66□□□□□ -1.18
USB1Q9BQ65 ZNF410-225ENST00000639051 936 ntTSL 5 BASIC7.66□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms