Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 BNIP3P7-201ENST00000605641 516 ntBASIC5.22□□□□□ -1.57
SSX3Q99909 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.22□□□□□ -1.57
SSX3Q99909 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.22□□□□□ -1.57
SSX3Q99909 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.22□□□□□ -1.57
SSX3Q99909 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.22□□□□□ -1.57
SSX3Q99909 MRPL57P1-201ENST00000621486 265 ntBASIC5.22□□□□□ -1.57
SSX3Q99909 AC012653.2-201ENST00000621880 420 ntBASIC5.22□□□□□ -1.57
SSX3Q99909 MIR6806-201ENST00000622141 64 ntBASIC5.22□□□□□ -1.57
SSX3Q99909 AC015722.2-201ENST00000622210 551 ntBASIC5.22□□□□□ -1.57
SSX3Q99909 LINC02495-203ENST00000636704 242 ntBASIC5.22□□□□□ -1.57
SSX3Q99909 AC000095.2-202ENST00000637415 154 ntBASIC5.22□□□□□ -1.57
SSX3Q99909 AL121936.2-201ENST00000641935 662 ntBASIC5.22□□□□□ -1.57
SSX3Q99909 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
SSX3Q99909 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
SSX3Q99909 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.22□□□□□ -1.57
SSX3Q99909 AL353796.1-201ENST00000561542 3241 ntBASIC5.22□□□□□ -1.57
SSX3Q99909 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.22□□□□□ -1.57
SSX3Q99909 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SSX3Q99909 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SSX3Q99909 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SSX3Q99909 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SSX3Q99909 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
SSX3Q99909 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SSX3Q99909 AC020656.2-201ENST00000613291 5309 ntBASIC5.21□□□□□ -1.57
SSX3Q99909 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
SSX3Q99909 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
SSX3Q99909 OR10AB1P-202ENST00000641219 1686 ntBASIC5.21□□□□□ -1.57
SSX3Q99909 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.21□□□□□ -1.57
SSX3Q99909 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.21□□□□□ -1.57
SSX3Q99909 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
SSX3Q99909 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.21□□□□□ -1.58
SSX3Q99909 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
SSX3Q99909 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
SSX3Q99909 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
SSX3Q99909 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
SSX3Q99909 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SSX3Q99909 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SSX3Q99909 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.21□□□□□ -1.58
SSX3Q99909 RPL11P4-201ENST00000332269 436 ntBASIC5.21□□□□□ -1.58
SSX3Q99909 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.21□□□□□ -1.58
SSX3Q99909 RNU6-386P-201ENST00000362650 107 ntBASIC5.21□□□□□ -1.58
SSX3Q99909 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SSX3Q99909 AC104297.1-201ENST00000393779 870 ntBASIC5.21□□□□□ -1.58
SSX3Q99909 VN1R12P-201ENST00000403778 876 ntBASIC5.21□□□□□ -1.58
SSX3Q99909 RN7SKP17-201ENST00000411242 351 ntBASIC5.21□□□□□ -1.58
SSX3Q99909 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.21□□□□□ -1.58
SSX3Q99909 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.21□□□□□ -1.58
SSX3Q99909 AC097721.1-201ENST00000427150 1253 ntBASIC5.21□□□□□ -1.58
SSX3Q99909 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.21□□□□□ -1.58
SSX3Q99909 AC093166.3-201ENST00000448785 303 ntBASIC5.21□□□□□ -1.58
SSX3Q99909 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.21□□□□□ -1.58
SSX3Q99909 RARRES2P3-201ENST00000457739 473 ntBASIC5.21□□□□□ -1.58
SSX3Q99909 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.21□□□□□ -1.58
SSX3Q99909 AC117394.1-201ENST00000477323 567 ntBASIC5.21□□□□□ -1.58
SSX3Q99909 OR9N1P-201ENST00000491296 333 ntBASIC5.21□□□□□ -1.58
SSX3Q99909 GM2AP2-201ENST00000491764 562 ntBASIC5.21□□□□□ -1.58
SSX3Q99909 AC112484.3-201ENST00000505910 329 ntBASIC5.21□□□□□ -1.58
SSX3Q99909 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC5.21□□□□□ -1.58
SSX3Q99909 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.21□□□□□ -1.58
SSX3Q99909 RNA5SP418-201ENST00000515951 117 ntBASIC5.21□□□□□ -1.58
SSX3Q99909 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.21□□□□□ -1.58
SSX3Q99909 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.21□□□□□ -1.58
SSX3Q99909 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SSX3Q99909 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SSX3Q99909 AC004232.2-201ENST00000574245 821 ntBASIC5.21□□□□□ -1.58
SSX3Q99909 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.21□□□□□ -1.58
SSX3Q99909 NPM1P45-201ENST00000583151 559 ntBASIC5.21□□□□□ -1.58
SSX3Q99909 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.21□□□□□ -1.58
SSX3Q99909 AC026898.1-201ENST00000586404 571 ntBASIC5.21□□□□□ -1.58
SSX3Q99909 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.21□□□□□ -1.58
SSX3Q99909 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SSX3Q99909 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.21□□□□□ -1.58
SSX3Q99909 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.21□□□□□ -1.58
SSX3Q99909 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.21□□□□□ -1.58
SSX3Q99909 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.21□□□□□ -1.58
SSX3Q99909 AL683826.1-201ENST00000624104 627 ntBASIC5.21□□□□□ -1.58
SSX3Q99909 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.21□□□□□ -1.58
SSX3Q99909 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC5.21□□□□□ -1.58
SSX3Q99909 CASC19-274ENST00000642018 970 ntBASIC5.21□□□□□ -1.58
SSX3Q99909 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
SSX3Q99909 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SSX3Q99909 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SSX3Q99909 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
SSX3Q99909 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SSX3Q99909 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.21□□□□□ -1.58
SSX3Q99909 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
SSX3Q99909 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SSX3Q99909 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.21□□□□□ -1.58
SSX3Q99909 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SSX3Q99909 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SSX3Q99909 RPL31P11-201ENST00000426558 1558 ntBASIC5.21□□□□□ -1.58
SSX3Q99909 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SSX3Q99909 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
SSX3Q99909 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.2□□□□□ -1.58
SSX3Q99909 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.2□□□□□ -1.58
SSX3Q99909 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SSX3Q99909 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.2□□□□□ -1.58
SSX3Q99909 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SSX3Q99909 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SSX3Q99909 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms