Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CDK5RAP1Q96SZ6 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 OR7E25P-201ENST00000344844 931 ntBASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 SNORD116-1-201ENST00000384335 95 ntBASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 OR8V1P-201ENST00000395193 873 ntBASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 YWHAZP6-201ENST00000399764 738 ntBASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 VN1R12P-201ENST00000403778 876 ntBASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 ZNF402P-201ENST00000404435 3100 ntBASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 TRIM60P5Y-201ENST00000413946 574 ntBASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 AC112492.2-201ENST00000432774 1030 ntBASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 MTND4P25-201ENST00000441039 533 ntBASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 CCNJP2-201ENST00000457810 1163 ntBASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 AC010468.1-201ENST00000461022 817 ntBASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 FTH1P8-201ENST00000498161 514 ntBASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 OR4D12P-201ENST00000509361 911 ntBASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 SNX18P25-201ENST00000510539 758 ntBASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 RNA5SP441-201ENST00000516809 88 ntBASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 AC007599.1-201ENST00000568688 1174 ntBASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 AP005136.1-201ENST00000579765 429 ntBASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 AL049840.6-201ENST00000604583 345 ntBASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 AL683826.1-201ENST00000624104 627 ntBASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 AC132825.7-201ENST00000638744 335 ntBASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 AL033543.1-201ENST00000623440 13454 ntBASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 AC110597.1-201ENST00000562669 3176 ntBASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CDK5RAP1Q96SZ6 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CDK5RAP1Q96SZ6 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.62□□□□□ -1.35
CDK5RAP1Q96SZ6 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
CDK5RAP1Q96SZ6 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CDK5RAP1Q96SZ6 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CDK5RAP1Q96SZ6 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.62□□□□□ -1.35
CDK5RAP1Q96SZ6 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.62□□□□□ -1.35
CDK5RAP1Q96SZ6 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CDK5RAP1Q96SZ6 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.62□□□□□ -1.35
CDK5RAP1Q96SZ6 FUNDC2P3-201ENST00000334716 533 ntBASIC6.62□□□□□ -1.35
CDK5RAP1Q96SZ6 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CDK5RAP1Q96SZ6 AC107977.1-201ENST00000355745 939 ntBASIC6.62□□□□□ -1.35
CDK5RAP1Q96SZ6 RNU1-65P-201ENST00000363919 148 ntBASIC6.62□□□□□ -1.35
CDK5RAP1Q96SZ6 Y_RNA.436-201ENST00000384097 102 ntBASIC6.62□□□□□ -1.35
CDK5RAP1Q96SZ6 ATP5F1P2-201ENST00000398143 760 ntBASIC6.62□□□□□ -1.35
CDK5RAP1Q96SZ6 MIR1275-201ENST00000408770 80 ntBASIC6.62□□□□□ -1.35
CDK5RAP1Q96SZ6 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.62□□□□□ -1.35
CDK5RAP1Q96SZ6 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC6.62□□□□□ -1.35
CDK5RAP1Q96SZ6 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC6.62□□□□□ -1.35
CDK5RAP1Q96SZ6 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.62□□□□□ -1.35
CDK5RAP1Q96SZ6 MTCO3P30-201ENST00000426425 670 ntBASIC6.62□□□□□ -1.35
CDK5RAP1Q96SZ6 UBE2D3P3-201ENST00000426992 425 ntBASIC6.62□□□□□ -1.35
CDK5RAP1Q96SZ6 AC108479.1-201ENST00000431142 427 ntBASIC6.62□□□□□ -1.35
CDK5RAP1Q96SZ6 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CDK5RAP1Q96SZ6 SUMO2P8-201ENST00000434672 286 ntBASIC6.62□□□□□ -1.35
CDK5RAP1Q96SZ6 AC094019.1-201ENST00000434678 472 ntBASIC6.62□□□□□ -1.35
CDK5RAP1Q96SZ6 GAPDHP59-201ENST00000435908 267 ntBASIC6.62□□□□□ -1.35
CDK5RAP1Q96SZ6 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.62□□□□□ -1.35
CDK5RAP1Q96SZ6 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC6.62□□□□□ -1.35
CDK5RAP1Q96SZ6 AC068491.1-201ENST00000449539 1241 ntBASIC6.62□□□□□ -1.35
CDK5RAP1Q96SZ6 HMGB1P7-201ENST00000450921 612 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms