Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 TNFAIP8-206ENST00000504771 8681 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 RNA5SP211-201ENST00000365516 117 ntBASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 AC007064.3-201ENST00000422608 359 ntBASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 OR56A7P-201ENST00000524865 941 ntBASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 KCTD9P4-201ENST00000526766 1166 ntBASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 GCSHP4-201ENST00000538792 439 ntBASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 MIR4277-201ENST00000578298 84 ntBASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 AC025574.2-201ENST00000615621 514 ntBASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 OR8B1P-202ENST00000641132 1178 ntBASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 COL4A6-202ENST00000372216 6570 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 RNA5SP478-201ENST00000364657 115 ntBASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 ADAMTS4-202ENST00000367996 9773 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 AL022237.1-201ENST00000446663 358 ntBASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 AC005962.2-201ENST00000611427 652 ntBASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 INTS6P1-201ENST00000504674 2530 ntBASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 AC104118.1-201ENST00000607625 1589 ntBASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 PHACTR1-201ENST00000332995 5332 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CSMD1Q96PZ7 ZBTB43-203ENST00000449886 5851 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 SEL1L-201ENST00000336735 7925 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 CSMD1-202ENST00000400186 10938 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 CSMD1-217ENST00000602723 10938 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 RN7SKP6-201ENST00000364795 319 ntBASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 AL050305.1-201ENST00000399993 1230 ntBASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 AC021483.2-201ENST00000567415 758 ntBASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 AC112694.2-201ENST00000623697 768 ntBASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 FAM129A-201ENST00000367511 6928 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 SHTN1-207ENST00000615301 6730 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 RN7SKP263-201ENST00000411194 309 ntBASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 RN7SKP100-201ENST00000411258 284 ntBASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 NIFKP3-201ENST00000417799 865 ntBASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 RNA5SP373-201ENST00000517271 95 ntBASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 AC024940.3-201ENST00000538551 316 ntBASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 ITGA11-202ENST00000423218 10192 ntAPPRIS ALT1 TSL 2 BASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 TENM2-205ENST00000519204 9427 ntTSL 5 BASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 BCOR-201ENST00000342274 6390 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 AC105235.1-201ENST00000623208 1816 ntBASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 SLC33A1-202ENST00000392845 9217 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 WDFY4-201ENST00000325239 10079 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 CPS1-IT1-201ENST00000628368 2306 ntBASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 BNIP3P5-201ENST00000562290 498 ntBASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 AC145423.1-201ENST00000605712 336 ntBASIC4.68□□□□□ -1.66
CSMD1Q96PZ7 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 WWC2-205ENST00000504005 5247 ntTSL 2 BASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.67□□□□□ -1.66
CSMD1Q96PZ7 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms