Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AC239803.2-201ENST00000610161 430 ntBASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 AC037198.3-201ENST00000616754 526 ntBASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
LYSMD4Q5XG99 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 CDY11P-201ENST00000447168 1651 ntBASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 RAD17P2-201ENST00000451754 1977 ntBASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 DOCK11P1-201ENST00000553480 5932 ntBASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 YES1P1-201ENST00000418510 1628 ntBASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 AL137058.3-201ENST00000624531 3099 ntBASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 TRGV7-201ENST00000427089 353 ntBASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 CYCSP51-201ENST00000443545 318 ntBASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 RN7SL30P-201ENST00000488416 306 ntBASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 IGLV3-30-201ENST00000524362 298 ntBASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 AC004825.1-201ENST00000555068 586 ntBASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 TXNP4-201ENST00000575018 310 ntBASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 MIR4700-201ENST00000578311 74 ntBASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 AC090953.1-201ENST00000604305 1092 ntBASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 AL021368.3-201ENST00000607119 578 ntBASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 uc_338.26-201ENST00000612659 160 ntBASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 AC008115.4-201ENST00000619780 775 ntBASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 AL390318.1-201ENST00000624564 687 ntBASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 CASC19-222ENST00000641321 1173 ntBASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 OR11H2-202ENST00000641517 1085 ntBASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.82□□□□□ -1.48
LYSMD4Q5XG99 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms