Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AL845331.3-201ENST00000562821 2028 ntTSL 2 BASIC8.8□□□□□ -1
VARS2Q5ST30 AC010533.1-201ENST00000624875 2105 ntBASIC8.8□□□□□ -1
VARS2Q5ST30 LINC00672-201ENST00000583195 3692 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
VARS2Q5ST30 CSMD2-205ENST00000373381 13698 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
VARS2Q5ST30 ZNF197-205ENST00000396058 4299 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
VARS2Q5ST30 PSD3-203ENST00000428502 6330 ntTSL 1 (best) BASIC8.8□□□□□ -1
VARS2Q5ST30 KEL-201ENST00000355265 2812 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
VARS2Q5ST30 METTL21EP-201ENST00000298105 713 ntBASIC8.8□□□□□ -1
VARS2Q5ST30 RN7SKP257-201ENST00000364525 309 ntBASIC8.8□□□□□ -1
VARS2Q5ST30 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC8.8□□□□□ -1
VARS2Q5ST30 MIR301B-201ENST00000390813 78 ntBASIC8.8□□□□□ -1
VARS2Q5ST30 MTCYBP4-201ENST00000401524 249 ntBASIC8.8□□□□□ -1
VARS2Q5ST30 RNU6-195P-201ENST00000411352 109 ntBASIC8.8□□□□□ -1
VARS2Q5ST30 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC8.8□□□□□ -1
VARS2Q5ST30 AC096644.3-201ENST00000416788 338 ntBASIC8.8□□□□□ -1
VARS2Q5ST30 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC8.8□□□□□ -1
VARS2Q5ST30 RBM22P7-201ENST00000421321 280 ntBASIC8.8□□□□□ -1
VARS2Q5ST30 RAD23BP1-201ENST00000421404 1227 ntBASIC8.8□□□□□ -1
VARS2Q5ST30 RPL5P6-201ENST00000425640 886 ntBASIC8.8□□□□□ -1
VARS2Q5ST30 AL160004.2-201ENST00000432935 350 ntBASIC8.8□□□□□ -1
VARS2Q5ST30 RPL37P21-201ENST00000435890 276 ntBASIC8.8□□□□□ -1
VARS2Q5ST30 LINC00578-201ENST00000439009 542 ntTSL 4 BASIC8.8□□□□□ -1
VARS2Q5ST30 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC8.8□□□□□ -1
VARS2Q5ST30 VN1R17P-201ENST00000472048 1090 ntBASIC8.8□□□□□ -1
VARS2Q5ST30 RN7SL241P-201ENST00000482973 236 ntBASIC8.8□□□□□ -1
VARS2Q5ST30 RPS3AP50-201ENST00000487064 803 ntBASIC8.8□□□□□ -1
VARS2Q5ST30 AC109811.2-201ENST00000509609 452 ntBASIC8.8□□□□□ -1
VARS2Q5ST30 KCTD9P2-201ENST00000512203 1013 ntBASIC8.8□□□□□ -1
VARS2Q5ST30 RNU6-1314P-201ENST00000517139 104 ntBASIC8.8□□□□□ -1
VARS2Q5ST30 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC8.8□□□□□ -1
VARS2Q5ST30 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC8.8□□□□□ -1
VARS2Q5ST30 AC022639.1-201ENST00000523191 573 ntTSL 4 BASIC8.8□□□□□ -1
VARS2Q5ST30 MRVI1-AS1-201ENST00000525578 829 ntTSL 3 BASIC8.8□□□□□ -1
VARS2Q5ST30 AP000911.4-201ENST00000532272 516 ntTSL 4 BASIC8.8□□□□□ -1
VARS2Q5ST30 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC8.8□□□□□ -1
VARS2Q5ST30 SLC25A3P2-201ENST00000547720 880 ntBASIC8.8□□□□□ -1
VARS2Q5ST30 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC8.8□□□□□ -1
VARS2Q5ST30 PFDN5-211ENST00000550846 392 ntTSL 2 BASIC8.8□□□□□ -1
VARS2Q5ST30 SRMP2-201ENST00000553832 916 ntBASIC8.8□□□□□ -1
VARS2Q5ST30 C16orf45-203ENST00000561692 534 ntTSL 3 BASIC8.8□□□□□ -1
VARS2Q5ST30 AC022165.1-201ENST00000568771 596 ntTSL 5 BASIC8.8□□□□□ -1
VARS2Q5ST30 RN7SL42P-201ENST00000579786 294 ntBASIC8.8□□□□□ -1
VARS2Q5ST30 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC8.8□□□□□ -1
VARS2Q5ST30 AL359704.2-201ENST00000604335 521 ntBASIC8.8□□□□□ -1
VARS2Q5ST30 AL008723.3-201ENST00000608926 449 ntBASIC8.8□□□□□ -1
VARS2Q5ST30 RN7SL3-201ENST00000610674 299 ntBASIC8.8□□□□□ -1
VARS2Q5ST30 AL121782.1-201ENST00000611242 413 ntBASIC8.8□□□□□ -1
VARS2Q5ST30 PTCHD3P1-201ENST00000612350 537 ntBASIC8.8□□□□□ -1
VARS2Q5ST30 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC8.8□□□□□ -1
VARS2Q5ST30 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
VARS2Q5ST30 CRNKL1-202ENST00000377340 4406 ntTSL 1 (best) BASIC8.8□□□□□ -1
VARS2Q5ST30 FCGR3B-201ENST00000294800 2385 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
VARS2Q5ST30 PDLIM5-201ENST00000317968 6083 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
VARS2Q5ST30 SLFN13-211ENST00000542635 5921 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
VARS2Q5ST30 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
VARS2Q5ST30 TBC1D5-219ENST00000446818 3124 ntTSL 1 (best) BASIC8.8□□□□□ -1
VARS2Q5ST30 COA1-203ENST00000395879 2448 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
VARS2Q5ST30 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC8.8□□□□□ -1
VARS2Q5ST30 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC8.8□□□□□ -1
VARS2Q5ST30 DROSHA-220ENST00000513349 4681 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
VARS2Q5ST30 AC110769.2-201ENST00000602760 1548 ntBASIC8.8□□□□□ -1
VARS2Q5ST30 FBXO38-201ENST00000296701 3680 ntTSL 2 BASIC8.79□□□□□ -1
VARS2Q5ST30 ZNF790-208ENST00000615484 2451 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
VARS2Q5ST30 ZFHX3-203ENST00000397992 13841 ntTSL 1 (best) BASIC8.79□□□□□ -1
VARS2Q5ST30 WDR44-203ENST00000371825 4029 ntTSL 1 (best) BASIC8.79□□□□□ -1
VARS2Q5ST30 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
VARS2Q5ST30 FAM193A-203ENST00000502458 4083 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
VARS2Q5ST30 ZNF169-203ENST00000480716 2716 ntTSL 1 (best) BASIC8.79□□□□□ -1
VARS2Q5ST30 MCM8-202ENST00000378883 3574 ntTSL 1 (best) BASIC8.79□□□□□ -1
VARS2Q5ST30 WISP3-202ENST00000361714 2512 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
VARS2Q5ST30 TET3-202ENST00000409262 11388 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
VARS2Q5ST30 AC103760.1-201ENST00000521326 1486 ntTSL 1 (best) BASIC8.79□□□□□ -1
VARS2Q5ST30 OR8G1-202ENST00000641972 5055 ntAPPRIS P1 BASIC8.79□□□□□ -1
VARS2Q5ST30 MYL6-201ENST00000293422 664 ntAPPRIS ALT1 TSL 2 BASIC8.79□□□□□ -1
VARS2Q5ST30 AC073343.1-201ENST00000328239 651 ntBASIC8.79□□□□□ -1
VARS2Q5ST30 Y_RNA.159-201ENST00000363674 87 ntBASIC8.79□□□□□ -1
VARS2Q5ST30 SPRR1A-201ENST00000368762 270 ntAPPRIS P1 BASIC8.79□□□□□ -1
VARS2Q5ST30 Y_RNA.527-201ENST00000384573 102 ntBASIC8.79□□□□□ -1
VARS2Q5ST30 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC8.79□□□□□ -1
VARS2Q5ST30 SNORD3J-201ENST00000408473 190 ntBASIC8.79□□□□□ -1
VARS2Q5ST30 RPL26P37-201ENST00000411983 438 ntBASIC8.79□□□□□ -1
VARS2Q5ST30 CTSLP8-201ENST00000413075 967 ntBASIC8.79□□□□□ -1
VARS2Q5ST30 AC009228.1-201ENST00000413254 240 ntTSL 2 BASIC8.79□□□□□ -1
VARS2Q5ST30 RBMY2JP-201ENST00000425544 1059 ntBASIC8.79□□□□□ -1
VARS2Q5ST30 AL512366.1-201ENST00000438919 636 ntTSL 3 BASIC8.79□□□□□ -1
VARS2Q5ST30 AL121871.1-201ENST00000443413 436 ntBASIC8.79□□□□□ -1
VARS2Q5ST30 AL645937.3-201ENST00000453647 936 ntBASIC8.79□□□□□ -1
VARS2Q5ST30 MTND1P12-201ENST00000455231 147 ntBASIC8.79□□□□□ -1
VARS2Q5ST30 PPP1R2P5-201ENST00000457256 603 ntBASIC8.79□□□□□ -1
VARS2Q5ST30 RN7SL464P-201ENST00000492743 297 ntBASIC8.79□□□□□ -1
VARS2Q5ST30 AC106760.2-201ENST00000504159 619 ntBASIC8.79□□□□□ -1
VARS2Q5ST30 AK6-204ENST00000512561 587 ntTSL 5 BASIC8.79□□□□□ -1
VARS2Q5ST30 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC8.79□□□□□ -1
VARS2Q5ST30 YWHABP2-201ENST00000540201 713 ntBASIC8.79□□□□□ -1
VARS2Q5ST30 AC024257.1-201ENST00000547523 566 ntTSL 4 BASIC8.79□□□□□ -1
VARS2Q5ST30 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC8.79□□□□□ -1
VARS2Q5ST30 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC8.79□□□□□ -1
VARS2Q5ST30 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC8.79□□□□□ -1
VARS2Q5ST30 AC233699.1-201ENST00000569955 1168 ntBASIC8.79□□□□□ -1
VARS2Q5ST30 RN7SL785P-201ENST00000578437 253 ntBASIC8.79□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms