Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC58Q4VC31 TDGP1-201ENST00000543961 1229 ntBASIC5.21□□□□□ -1.58
CCDC58Q4VC31 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.21□□□□□ -1.58
CCDC58Q4VC31 AC127381.1-201ENST00000555979 939 ntBASIC5.21□□□□□ -1.58
CCDC58Q4VC31 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.21□□□□□ -1.58
CCDC58Q4VC31 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.21□□□□□ -1.58
CCDC58Q4VC31 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC58Q4VC31 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC58Q4VC31 AC036176.3-201ENST00000602456 418 ntBASIC5.21□□□□□ -1.58
CCDC58Q4VC31 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC58Q4VC31 AC099777.1-201ENST00000603779 1070 ntBASIC5.21□□□□□ -1.58
CCDC58Q4VC31 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC58Q4VC31 AL645933.2-201ENST00000606743 1207 ntBASIC5.21□□□□□ -1.58
CCDC58Q4VC31 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC58Q4VC31 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC58Q4VC31 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC58Q4VC31 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC58Q4VC31 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC58Q4VC31 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
CCDC58Q4VC31 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC58Q4VC31 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC58Q4VC31 AC217777.1-201ENST00000570034 1471 ntBASIC5.2□□□□□ -1.58
CCDC58Q4VC31 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC58Q4VC31 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CCDC58Q4VC31 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC58Q4VC31 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.2□□□□□ -1.58
CCDC58Q4VC31 RBMY1HP-201ENST00000382759 1389 ntBASIC5.2□□□□□ -1.58
CCDC58Q4VC31 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
CCDC58Q4VC31 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC58Q4VC31 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.2□□□□□ -1.58
CCDC58Q4VC31 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC58Q4VC31 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC58Q4VC31 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC58Q4VC31 RN7SKP185-201ENST00000362813 326 ntBASIC5.2□□□□□ -1.58
CCDC58Q4VC31 RNU4-44P-201ENST00000363050 141 ntBASIC5.2□□□□□ -1.58
CCDC58Q4VC31 U3.7-201ENST00000363668 216 ntBASIC5.2□□□□□ -1.58
CCDC58Q4VC31 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC58Q4VC31 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC5.2□□□□□ -1.58
CCDC58Q4VC31 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC58Q4VC31 CTSL3P-202ENST00000412179 788 ntBASIC5.2□□□□□ -1.58
CCDC58Q4VC31 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.2□□□□□ -1.58
CCDC58Q4VC31 MTND2P12-201ENST00000417560 1252 ntBASIC5.2□□□□□ -1.58
CCDC58Q4VC31 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC58Q4VC31 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC58Q4VC31 RPL31P11-202ENST00000454082 372 ntBASIC5.2□□□□□ -1.58
CCDC58Q4VC31 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
CCDC58Q4VC31 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC58Q4VC31 AC006539.1-201ENST00000481419 501 ntBASIC5.2□□□□□ -1.58
CCDC58Q4VC31 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC58Q4VC31 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC58Q4VC31 MIR2117-201ENST00000516780 80 ntBASIC5.2□□□□□ -1.58
CCDC58Q4VC31 RNA5SP75-201ENST00000516841 111 ntBASIC5.2□□□□□ -1.58
CCDC58Q4VC31 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.2□□□□□ -1.58
CCDC58Q4VC31 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC58Q4VC31 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC58Q4VC31 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC58Q4VC31 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC58Q4VC31 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC58Q4VC31 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.2□□□□□ -1.58
CCDC58Q4VC31 AC068408.1-201ENST00000577406 1144 ntBASIC5.2□□□□□ -1.58
CCDC58Q4VC31 MIR3936-201ENST00000584304 110 ntBASIC5.2□□□□□ -1.58
CCDC58Q4VC31 AL589765.6-201ENST00000601909 549 ntBASIC5.2□□□□□ -1.58
CCDC58Q4VC31 HIRAP1-201ENST00000605318 787 ntBASIC5.2□□□□□ -1.58
CCDC58Q4VC31 AC007786.3-201ENST00000615154 596 ntBASIC5.2□□□□□ -1.58
CCDC58Q4VC31 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC58Q4VC31 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CCDC58Q4VC31 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC58Q4VC31 TTC39DP-201ENST00000416781 1688 ntBASIC5.2□□□□□ -1.58
CCDC58Q4VC31 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CCDC58Q4VC31 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC58Q4VC31 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC58Q4VC31 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC58Q4VC31 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CCDC58Q4VC31 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
CCDC58Q4VC31 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC58Q4VC31 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC58Q4VC31 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC58Q4VC31 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.19□□□□□ -1.58
CCDC58Q4VC31 BTBD10P1-201ENST00000549824 1352 ntBASIC5.19□□□□□ -1.58
CCDC58Q4VC31 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC58Q4VC31 AC025574.1-201ENST00000554784 1653 ntBASIC5.19□□□□□ -1.58
CCDC58Q4VC31 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.19□□□□□ -1.58
CCDC58Q4VC31 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC58Q4VC31 AL080312.1-201ENST00000256654 824 ntBASIC5.19□□□□□ -1.58
CCDC58Q4VC31 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC58Q4VC31 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CCDC58Q4VC31 RNU1-136P-201ENST00000384181 164 ntBASIC5.19□□□□□ -1.58
CCDC58Q4VC31 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CCDC58Q4VC31 MIR1266-201ENST00000408125 84 ntBASIC5.19□□□□□ -1.58
CCDC58Q4VC31 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC58Q4VC31 RN7SKP97-201ENST00000410966 333 ntBASIC5.19□□□□□ -1.58
CCDC58Q4VC31 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.19□□□□□ -1.58
CCDC58Q4VC31 OR13Z1P-201ENST00000416141 834 ntBASIC5.19□□□□□ -1.58
CCDC58Q4VC31 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC58Q4VC31 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC58Q4VC31 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC58Q4VC31 SEPT14P12-201ENST00000442280 560 ntBASIC5.19□□□□□ -1.58
CCDC58Q4VC31 ZNF619P1-201ENST00000446539 752 ntBASIC5.19□□□□□ -1.58
CCDC58Q4VC31 AL034369.1-201ENST00000453808 477 ntBASIC5.19□□□□□ -1.58
CCDC58Q4VC31 TREML3P-201ENST00000457327 501 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms