Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 SETP3-201ENST00000581726 813 ntBASIC5.61□□□□□ -1.51
LTBQ06643 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.61□□□□□ -1.51
LTBQ06643 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.61□□□□□ -1.51
LTBQ06643 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.61□□□□□ -1.51
LTBQ06643 AC027334.1-201ENST00000603257 310 ntBASIC5.61□□□□□ -1.51
LTBQ06643 CR788268.1-201ENST00000603931 1809 ntBASIC5.61□□□□□ -1.51
LTBQ06643 AC092944.2-201ENST00000605443 889 ntBASIC5.61□□□□□ -1.51
LTBQ06643 AC008833.1-201ENST00000611633 691 ntBASIC5.61□□□□□ -1.51
LTBQ06643 AC022106.1-201ENST00000612834 766 ntBASIC5.61□□□□□ -1.51
LTBQ06643 AC104763.3-201ENST00000613765 618 ntBASIC5.61□□□□□ -1.51
LTBQ06643 AL121768.1-201ENST00000613917 2544 ntBASIC5.61□□□□□ -1.51
LTBQ06643 U1.25-201ENST00000614085 162 ntBASIC5.61□□□□□ -1.51
LTBQ06643 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.61□□□□□ -1.51
LTBQ06643 U1.34-201ENST00000618578 162 ntBASIC5.61□□□□□ -1.51
LTBQ06643 U1.31-201ENST00000620022 160 ntBASIC5.61□□□□□ -1.51
LTBQ06643 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC5.61□□□□□ -1.51
LTBQ06643 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.61□□□□□ -1.51
LTBQ06643 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
LTBQ06643 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LTBQ06643 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.61□□□□□ -1.51
LTBQ06643 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
LTBQ06643 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
LTBQ06643 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
LTBQ06643 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
LTBQ06643 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.6□□□□□ -1.51
LTBQ06643 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
LTBQ06643 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LTBQ06643 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LTBQ06643 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.6□□□□□ -1.51
LTBQ06643 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
LTBQ06643 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.6□□□□□ -1.51
LTBQ06643 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
LTBQ06643 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
LTBQ06643 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.6□□□□□ -1.51
LTBQ06643 OR51C1P-202ENST00000641159 1444 ntBASIC5.6□□□□□ -1.51
LTBQ06643 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.6□□□□□ -1.51
LTBQ06643 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
LTBQ06643 AC005725.1-201ENST00000577346 2607 ntBASIC5.6□□□□□ -1.51
LTBQ06643 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LTBQ06643 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LTBQ06643 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
LTBQ06643 OR2W4P-201ENST00000406496 926 ntBASIC5.6□□□□□ -1.51
LTBQ06643 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.6□□□□□ -1.51
LTBQ06643 RNA5SP178-201ENST00000410380 128 ntBASIC5.6□□□□□ -1.51
LTBQ06643 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.6□□□□□ -1.51
LTBQ06643 SLC20A1P1-201ENST00000413906 956 ntBASIC5.6□□□□□ -1.51
LTBQ06643 AL357078.2-201ENST00000416486 427 ntBASIC5.6□□□□□ -1.51
LTBQ06643 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.6□□□□□ -1.51
LTBQ06643 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.6□□□□□ -1.51
LTBQ06643 PPIAP10-201ENST00000438675 458 ntBASIC5.6□□□□□ -1.51
LTBQ06643 AC074367.1-201ENST00000438685 1125 ntBASIC5.6□□□□□ -1.51
LTBQ06643 AL645638.1-201ENST00000440519 361 ntBASIC5.6□□□□□ -1.51
LTBQ06643 AC092473.1-201ENST00000441098 221 ntBASIC5.6□□□□□ -1.51
LTBQ06643 CXCR2P1-202ENST00000443392 1074 ntBASIC5.6□□□□□ -1.51
LTBQ06643 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LTBQ06643 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.6□□□□□ -1.51
LTBQ06643 OR52I1-201ENST00000450052 1050 ntBASIC5.6□□□□□ -1.51
LTBQ06643 TVP23BP2-201ENST00000455082 615 ntBASIC5.6□□□□□ -1.51
LTBQ06643 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.6□□□□□ -1.51
LTBQ06643 AC112187.1-201ENST00000455837 479 ntBASIC5.6□□□□□ -1.51
LTBQ06643 RN7SL104P-201ENST00000498686 293 ntBASIC5.6□□□□□ -1.51
LTBQ06643 SNX18P24-201ENST00000505249 671 ntBASIC5.6□□□□□ -1.51
LTBQ06643 AC114322.1-201ENST00000506771 926 ntBASIC5.6□□□□□ -1.51
LTBQ06643 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.6□□□□□ -1.51
LTBQ06643 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.6□□□□□ -1.51
LTBQ06643 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.6□□□□□ -1.51
LTBQ06643 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
LTBQ06643 AP003102.1-201ENST00000525638 661 ntBASIC5.6□□□□□ -1.51
LTBQ06643 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.6□□□□□ -1.51
LTBQ06643 AC009268.1-201ENST00000561352 1203 ntBASIC5.6□□□□□ -1.51
LTBQ06643 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LTBQ06643 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.6□□□□□ -1.51
LTBQ06643 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC5.6□□□□□ -1.51
LTBQ06643 AC090651.1-201ENST00000567865 634 ntBASIC5.6□□□□□ -1.51
LTBQ06643 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.6□□□□□ -1.51
LTBQ06643 RNU4ATAC-201ENST00000580972 127 ntBASIC5.6□□□□□ -1.51
LTBQ06643 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.6□□□□□ -1.51
LTBQ06643 AC020916.2-201ENST00000591242 360 ntBASIC5.6□□□□□ -1.51
LTBQ06643 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.6□□□□□ -1.51
LTBQ06643 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.6□□□□□ -1.51
LTBQ06643 AP001437.1-201ENST00000608783 456 ntBASIC5.6□□□□□ -1.51
LTBQ06643 AC084824.5-201ENST00000612009 413 ntBASIC5.6□□□□□ -1.51
LTBQ06643 AC016597.2-201ENST00000613256 341 ntBASIC5.6□□□□□ -1.51
LTBQ06643 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.6□□□□□ -1.51
LTBQ06643 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.6□□□□□ -1.51
LTBQ06643 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
LTBQ06643 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
LTBQ06643 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
LTBQ06643 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.6□□□□□ -1.51
LTBQ06643 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.6□□□□□ -1.51
LTBQ06643 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
LTBQ06643 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
LTBQ06643 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.6□□□□□ -1.51
LTBQ06643 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LTBQ06643 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LTBQ06643 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
LTBQ06643 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LTBQ06643 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.6□□□□□ -1.51
LTBQ06643 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.6□□□□□ -1.51
LTBQ06643 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms