Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CDH11P55287 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.5□□□□□ -1.53
CDH11P55287 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDH11P55287 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.49□□□□□ -1.53
CDH11P55287 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDH11P55287 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.49□□□□□ -1.53
CDH11P55287 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDH11P55287 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CDH11P55287 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
CDH11P55287 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDH11P55287 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDH11P55287 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.49□□□□□ -1.53
CDH11P55287 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.49□□□□□ -1.53
CDH11P55287 AL050305.1-201ENST00000399993 1230 ntBASIC5.49□□□□□ -1.53
CDH11P55287 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.49□□□□□ -1.53
CDH11P55287 RN7SKP121-201ENST00000410842 305 ntBASIC5.49□□□□□ -1.53
CDH11P55287 RN7SKP144-201ENST00000411108 279 ntBASIC5.49□□□□□ -1.53
CDH11P55287 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.49□□□□□ -1.53
CDH11P55287 PTCD2P2-201ENST00000415579 1095 ntBASIC5.49□□□□□ -1.53
CDH11P55287 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.49□□□□□ -1.53
CDH11P55287 RPS7P14-201ENST00000426405 583 ntBASIC5.49□□□□□ -1.53
CDH11P55287 RPSAP65-201ENST00000429660 595 ntBASIC5.49□□□□□ -1.53
CDH11P55287 AC094019.1-201ENST00000434678 472 ntBASIC5.49□□□□□ -1.53
CDH11P55287 AC009963.3-201ENST00000458090 486 ntBASIC5.49□□□□□ -1.53
CDH11P55287 AC089999.1-201ENST00000460336 374 ntBASIC5.49□□□□□ -1.53
CDH11P55287 HMGN1P8-201ENST00000463578 288 ntBASIC5.49□□□□□ -1.53
CDH11P55287 AC090589.1-201ENST00000473109 362 ntBASIC5.49□□□□□ -1.53
CDH11P55287 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.49□□□□□ -1.53
CDH11P55287 RPL12P30-201ENST00000488389 499 ntBASIC5.49□□□□□ -1.53
CDH11P55287 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.49□□□□□ -1.53
CDH11P55287 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.49□□□□□ -1.53
CDH11P55287 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.49□□□□□ -1.53
CDH11P55287 TOMM22P4-201ENST00000511318 336 ntBASIC5.49□□□□□ -1.53
CDH11P55287 snoU109.5-201ENST00000516231 132 ntBASIC5.49□□□□□ -1.53
CDH11P55287 AP001858.2-201ENST00000536213 601 ntBASIC5.49□□□□□ -1.53
CDH11P55287 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
CDH11P55287 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.49□□□□□ -1.53
CDH11P55287 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.49□□□□□ -1.53
CDH11P55287 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.49□□□□□ -1.53
CDH11P55287 AC124916.2-201ENST00000604416 224 ntBASIC5.49□□□□□ -1.53
CDH11P55287 AL713998.2-201ENST00000604538 1198 ntBASIC5.49□□□□□ -1.53
CDH11P55287 AC010998.3-201ENST00000613871 631 ntBASIC5.49□□□□□ -1.53
CDH11P55287 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.49□□□□□ -1.53
CDH11P55287 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.49□□□□□ -1.53
CDH11P55287 AC103798.2-201ENST00000624292 632 ntBASIC5.49□□□□□ -1.53
CDH11P55287 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CDH11P55287 MIR1910-201ENST00000636955 80 ntBASIC5.49□□□□□ -1.53
CDH11P55287 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.49□□□□□ -1.53
CDH11P55287 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.49□□□□□ -1.53
CDH11P55287 AC087516.1-201ENST00000561236 2428 ntBASIC5.49□□□□□ -1.53
CDH11P55287 AC016583.1-201ENST00000624221 2431 ntBASIC5.49□□□□□ -1.53
CDH11P55287 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDH11P55287 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDH11P55287 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDH11P55287 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
CDH11P55287 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDH11P55287 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.49□□□□□ -1.53
CDH11P55287 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CDH11P55287 AL161756.3-201ENST00000641216 2071 ntBASIC5.49□□□□□ -1.53
CDH11P55287 AC024587.1-201ENST00000505925 2157 ntBASIC5.49□□□□□ -1.53
CDH11P55287 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDH11P55287 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
CDH11P55287 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CDH11P55287 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CDH11P55287 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDH11P55287 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDH11P55287 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDH11P55287 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CDH11P55287 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.48□□□□□ -1.53
CDH11P55287 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.48□□□□□ -1.53
CDH11P55287 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
CDH11P55287 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CDH11P55287 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDH11P55287 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CDH11P55287 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CDH11P55287 AC024651.2-201ENST00000562480 2098 ntBASIC5.48□□□□□ -1.53
CDH11P55287 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.48□□□□□ -1.53
CDH11P55287 AC104966.1-201ENST00000467010 1464 ntBASIC5.48□□□□□ -1.53
CDH11P55287 CASC19-255ENST00000641733 1385 ntBASIC5.48□□□□□ -1.53
CDH11P55287 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDH11P55287 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.48□□□□□ -1.53
CDH11P55287 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDH11P55287 RNU1-49P-201ENST00000363468 159 ntBASIC5.48□□□□□ -1.53
CDH11P55287 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.48□□□□□ -1.53
CDH11P55287 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CDH11P55287 AL157702.1-201ENST00000398764 426 ntBASIC5.48□□□□□ -1.53
CDH11P55287 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.48□□□□□ -1.53
CDH11P55287 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.48□□□□□ -1.53
CDH11P55287 AC013268.2-201ENST00000420753 337 ntBASIC5.48□□□□□ -1.53
CDH11P55287 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.48□□□□□ -1.53
CDH11P55287 AC012497.1-201ENST00000429392 575 ntBASIC5.48□□□□□ -1.53
CDH11P55287 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.48□□□□□ -1.53
CDH11P55287 PPIAP10-201ENST00000438675 458 ntBASIC5.48□□□□□ -1.53
CDH11P55287 SOCS5P1-201ENST00000440415 949 ntBASIC5.48□□□□□ -1.53
CDH11P55287 CUBNP2-201ENST00000443534 1139 ntBASIC5.48□□□□□ -1.53
CDH11P55287 Z83838.1-202ENST00000456225 839 ntBASIC5.48□□□□□ -1.53
CDH11P55287 AL049829.1-201ENST00000465411 156 ntBASIC5.48□□□□□ -1.53
CDH11P55287 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.48□□□□□ -1.53
CDH11P55287 RPL23AP40-201ENST00000487630 390 ntBASIC5.48□□□□□ -1.53
CDH11P55287 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms