Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.02□□□□□ -1.45
CDH6P55285 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CDH6P55285 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CDH6P55285 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CDH6P55285 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CDH6P55285 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
CDH6P55285 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
CDH6P55285 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CDH6P55285 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
CDH6P55285 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.02□□□□□ -1.45
CDH6P55285 AC117409.1-201ENST00000470499 1310 ntBASIC6.01□□□□□ -1.45
CDH6P55285 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CDH6P55285 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CDH6P55285 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CDH6P55285 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CDH6P55285 RNA5SP273-201ENST00000362484 113 ntBASIC6.01□□□□□ -1.45
CDH6P55285 RN7SKP275-201ENST00000364626 301 ntBASIC6.01□□□□□ -1.45
CDH6P55285 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.01□□□□□ -1.45
CDH6P55285 CXADRP1-201ENST00000398098 1095 ntBASIC6.01□□□□□ -1.45
CDH6P55285 OR2W4P-201ENST00000406496 926 ntBASIC6.01□□□□□ -1.45
CDH6P55285 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.01□□□□□ -1.45
CDH6P55285 AC019205.1-201ENST00000421830 730 ntBASIC6.01□□□□□ -1.45
CDH6P55285 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.01□□□□□ -1.45
CDH6P55285 VN1R21P-201ENST00000426703 765 ntBASIC6.01□□□□□ -1.45
CDH6P55285 AC126120.1-201ENST00000431082 470 ntBASIC6.01□□□□□ -1.45
CDH6P55285 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.01□□□□□ -1.45
CDH6P55285 AC110602.1-201ENST00000437414 318 ntBASIC6.01□□□□□ -1.45
CDH6P55285 EIF5AP4-201ENST00000441206 465 ntBASIC6.01□□□□□ -1.45
CDH6P55285 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.01□□□□□ -1.45
CDH6P55285 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.01□□□□□ -1.45
CDH6P55285 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6.01□□□□□ -1.45
CDH6P55285 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.01□□□□□ -1.45
CDH6P55285 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.01□□□□□ -1.45
CDH6P55285 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC6.01□□□□□ -1.45
CDH6P55285 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.01□□□□□ -1.45
CDH6P55285 IGLV3-30-201ENST00000524362 298 ntBASIC6.01□□□□□ -1.45
CDH6P55285 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.01□□□□□ -1.45
CDH6P55285 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.01□□□□□ -1.45
CDH6P55285 AL356801.1-201ENST00000559320 294 ntBASIC6.01□□□□□ -1.45
CDH6P55285 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.01□□□□□ -1.45
CDH6P55285 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.01□□□□□ -1.45
CDH6P55285 AL352984.2-202ENST00000613699 155 ntBASIC6.01□□□□□ -1.45
CDH6P55285 CXADRP3-202ENST00000617265 1100 ntBASIC6.01□□□□□ -1.45
CDH6P55285 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.01□□□□□ -1.45
CDH6P55285 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CDH6P55285 GTF2IP4-201ENST00000453092 2054 ntBASIC6.01□□□□□ -1.45
CDH6P55285 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CDH6P55285 PDZK1P1-202ENST00000425209 1350 ntBASIC6.01□□□□□ -1.45
CDH6P55285 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
CDH6P55285 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
CDH6P55285 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CDH6P55285 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.01□□□□□ -1.45
CDH6P55285 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CDH6P55285 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
CDH6P55285 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6□□□□□ -1.45
CDH6P55285 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6□□□□□ -1.45
CDH6P55285 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CDH6P55285 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6□□□□□ -1.45
CDH6P55285 AC004076.2-201ENST00000620532 3323 ntBASIC6□□□□□ -1.45
CDH6P55285 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CDH6P55285 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CDH6P55285 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6□□□□□ -1.45
CDH6P55285 TMSB4XP2-201ENST00000335179 210 ntBASIC6□□□□□ -1.45
CDH6P55285 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CDH6P55285 RNA5SP500-201ENST00000364486 119 ntBASIC6□□□□□ -1.45
CDH6P55285 SUGT1P2-201ENST00000379452 992 ntBASIC6□□□□□ -1.45
CDH6P55285 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6□□□□□ -1.45
CDH6P55285 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6□□□□□ -1.45
CDH6P55285 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6□□□□□ -1.45
CDH6P55285 RN7SKP279-201ENST00000411383 298 ntBASIC6□□□□□ -1.45
CDH6P55285 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6□□□□□ -1.45
CDH6P55285 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6□□□□□ -1.45
CDH6P55285 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6□□□□□ -1.45
CDH6P55285 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6□□□□□ -1.45
CDH6P55285 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6□□□□□ -1.45
CDH6P55285 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6□□□□□ -1.45
CDH6P55285 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6□□□□□ -1.45
CDH6P55285 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6□□□□□ -1.45
CDH6P55285 FTO-202ENST00000431610 707 ntTSL 3 BASIC6□□□□□ -1.45
CDH6P55285 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6□□□□□ -1.45
CDH6P55285 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC6□□□□□ -1.45
CDH6P55285 AC242426.1-201ENST00000435270 960 ntBASIC6□□□□□ -1.45
CDH6P55285 NDUFS5P5-201ENST00000437256 321 ntBASIC6□□□□□ -1.45
CDH6P55285 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6□□□□□ -1.45
CDH6P55285 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6□□□□□ -1.45
CDH6P55285 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6□□□□□ -1.45
CDH6P55285 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6□□□□□ -1.45
CDH6P55285 REG1CP-206ENST00000447469 496 ntBASIC6□□□□□ -1.45
CDH6P55285 OR7E116P-201ENST00000448529 957 ntBASIC6□□□□□ -1.45
CDH6P55285 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6□□□□□ -1.45
CDH6P55285 OR5H7P-201ENST00000514084 930 ntBASIC6□□□□□ -1.45
CDH6P55285 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6□□□□□ -1.45
CDH6P55285 Y_RNA.667-201ENST00000516212 107 ntBASIC6□□□□□ -1.45
CDH6P55285 RNA5SP438-201ENST00000516561 112 ntBASIC6□□□□□ -1.45
CDH6P55285 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC6□□□□□ -1.45
CDH6P55285 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6□□□□□ -1.45
CDH6P55285 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6□□□□□ -1.45
CDH6P55285 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6□□□□□ -1.45
CDH6P55285 FAM27E4-201ENST00000605259 342 ntBASIC6□□□□□ -1.45
CDH6P55285 HIRAP1-201ENST00000605318 787 ntBASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms