Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HMGCS2P54868 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HMGCS2P54868 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HMGCS2P54868 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HMGCS2P54868 AL391262.1-201ENST00000556558 1992 ntBASIC6.66□□□□□ -1.34
HMGCS2P54868 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
HMGCS2P54868 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HMGCS2P54868 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
HMGCS2P54868 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
HMGCS2P54868 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
HMGCS2P54868 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.65□□□□□ -1.34
HMGCS2P54868 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
HMGCS2P54868 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
HMGCS2P54868 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
HMGCS2P54868 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
HMGCS2P54868 AC015977.1-201ENST00000418887 292 ntBASIC6.65□□□□□ -1.34
HMGCS2P54868 NENFP1-201ENST00000419476 466 ntBASIC6.65□□□□□ -1.34
HMGCS2P54868 CYCSP12-201ENST00000437729 300 ntBASIC6.65□□□□□ -1.34
HMGCS2P54868 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.65□□□□□ -1.34
HMGCS2P54868 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.65□□□□□ -1.34
HMGCS2P54868 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
HMGCS2P54868 AC004129.2-201ENST00000457229 287 ntBASIC6.65□□□□□ -1.34
HMGCS2P54868 RNU1-88P-201ENST00000459274 128 ntBASIC6.65□□□□□ -1.34
HMGCS2P54868 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC6.65□□□□□ -1.34
HMGCS2P54868 AC090638.1-201ENST00000498296 909 ntBASIC6.65□□□□□ -1.34
HMGCS2P54868 NDUFA5P12-201ENST00000503796 343 ntBASIC6.65□□□□□ -1.34
HMGCS2P54868 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.65□□□□□ -1.34
HMGCS2P54868 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.65□□□□□ -1.34
HMGCS2P54868 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.65□□□□□ -1.34
HMGCS2P54868 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC6.65□□□□□ -1.34
HMGCS2P54868 MIR7155-201ENST00000615925 56 ntBASIC6.65□□□□□ -1.34
HMGCS2P54868 AC037198.3-201ENST00000616754 526 ntBASIC6.65□□□□□ -1.34
HMGCS2P54868 AF117829.2-201ENST00000619538 361 ntBASIC6.65□□□□□ -1.34
HMGCS2P54868 AC004836.1-201ENST00000623032 634 ntBASIC6.65□□□□□ -1.34
HMGCS2P54868 AC132068.1-201ENST00000623805 459 ntBASIC6.65□□□□□ -1.34
HMGCS2P54868 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC6.65□□□□□ -1.34
HMGCS2P54868 AL034408.1-201ENST00000637712 664 ntBASIC6.65□□□□□ -1.34
HMGCS2P54868 FBXL21-201ENST00000297158 1305 ntBASIC6.65□□□□□ -1.35
HMGCS2P54868 AC018765.1-201ENST00000623357 3446 ntBASIC6.65□□□□□ -1.35
HMGCS2P54868 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
HMGCS2P54868 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
HMGCS2P54868 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.65□□□□□ -1.35
HMGCS2P54868 AC073429.2-201ENST00000569694 1444 ntBASIC6.65□□□□□ -1.35
HMGCS2P54868 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
HMGCS2P54868 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
HMGCS2P54868 AC112243.1-201ENST00000623949 3851 ntBASIC6.65□□□□□ -1.35
HMGCS2P54868 AL161912.4-201ENST00000623889 2468 ntBASIC6.65□□□□□ -1.35
HMGCS2P54868 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
HMGCS2P54868 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HMGCS2P54868 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
HMGCS2P54868 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.64□□□□□ -1.35
HMGCS2P54868 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
HMGCS2P54868 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.64□□□□□ -1.35
HMGCS2P54868 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
HMGCS2P54868 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
HMGCS2P54868 RN7SKP28-201ENST00000364770 305 ntBASIC6.64□□□□□ -1.35
HMGCS2P54868 RNA5SP30-201ENST00000365552 115 ntBASIC6.64□□□□□ -1.35
HMGCS2P54868 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
HMGCS2P54868 TMA16P2-201ENST00000413187 601 ntBASIC6.64□□□□□ -1.35
HMGCS2P54868 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.64□□□□□ -1.35
HMGCS2P54868 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.64□□□□□ -1.35
HMGCS2P54868 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.64□□□□□ -1.35
HMGCS2P54868 AL139148.1-201ENST00000427122 680 ntBASIC6.64□□□□□ -1.35
HMGCS2P54868 AC016027.5-201ENST00000427227 210 ntBASIC6.64□□□□□ -1.35
HMGCS2P54868 RPL7L1P9-201ENST00000431298 745 ntBASIC6.64□□□□□ -1.35
HMGCS2P54868 CNOT7P2-201ENST00000441051 832 ntBASIC6.64□□□□□ -1.35
HMGCS2P54868 EEF1B2P5-201ENST00000444820 548 ntBASIC6.64□□□□□ -1.35
HMGCS2P54868 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.64□□□□□ -1.35
HMGCS2P54868 RN7SL51P-201ENST00000468230 285 ntBASIC6.64□□□□□ -1.35
HMGCS2P54868 AC021146.10-201ENST00000515628 706 ntBASIC6.64□□□□□ -1.35
HMGCS2P54868 CDC42P3-201ENST00000518493 633 ntBASIC6.64□□□□□ -1.35
HMGCS2P54868 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.64□□□□□ -1.35
HMGCS2P54868 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.64□□□□□ -1.35
HMGCS2P54868 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC6.64□□□□□ -1.35
HMGCS2P54868 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.64□□□□□ -1.35
HMGCS2P54868 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC6.64□□□□□ -1.35
HMGCS2P54868 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC6.64□□□□□ -1.35
HMGCS2P54868 AC137695.1-201ENST00000604126 489 ntBASIC6.64□□□□□ -1.35
HMGCS2P54868 PPATP2-201ENST00000605635 508 ntBASIC6.64□□□□□ -1.35
HMGCS2P54868 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HMGCS2P54868 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HMGCS2P54868 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HMGCS2P54868 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HMGCS2P54868 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
HMGCS2P54868 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.64□□□□□ -1.35
HMGCS2P54868 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC6.64□□□□□ -1.35
HMGCS2P54868 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.64□□□□□ -1.35
HMGCS2P54868 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HMGCS2P54868 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.64□□□□□ -1.35
HMGCS2P54868 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HMGCS2P54868 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
HMGCS2P54868 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
HMGCS2P54868 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.63□□□□□ -1.35
HMGCS2P54868 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HMGCS2P54868 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HMGCS2P54868 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.63□□□□□ -1.35
HMGCS2P54868 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HMGCS2P54868 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC6.63□□□□□ -1.35
HMGCS2P54868 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HMGCS2P54868 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms