Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 SNORA11.3-201ENST00000408471 128 ntBASIC6.88□□□□□ -1.31
EPHB3P54753 RNA5SP115-201ENST00000411160 107 ntBASIC6.88□□□□□ -1.31
EPHB3P54753 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
EPHB3P54753 HMGB1P49-201ENST00000418882 569 ntBASIC6.88□□□□□ -1.31
EPHB3P54753 RPL30P16-201ENST00000419341 429 ntBASIC6.88□□□□□ -1.31
EPHB3P54753 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.88□□□□□ -1.31
EPHB3P54753 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC6.88□□□□□ -1.31
EPHB3P54753 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
EPHB3P54753 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC6.88□□□□□ -1.31
EPHB3P54753 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.88□□□□□ -1.31
EPHB3P54753 C8orf59P1-201ENST00000429930 303 ntBASIC6.88□□□□□ -1.31
EPHB3P54753 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
EPHB3P54753 GAPDHP59-201ENST00000435908 267 ntBASIC6.88□□□□□ -1.31
EPHB3P54753 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
EPHB3P54753 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC6.88□□□□□ -1.31
EPHB3P54753 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.88□□□□□ -1.31
EPHB3P54753 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC6.88□□□□□ -1.31
EPHB3P54753 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC6.88□□□□□ -1.31
EPHB3P54753 NPM1P13-201ENST00000452663 865 ntBASIC6.88□□□□□ -1.31
EPHB3P54753 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC6.88□□□□□ -1.31
EPHB3P54753 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC6.88□□□□□ -1.31
EPHB3P54753 ATG12P2-201ENST00000456830 416 ntBASIC6.88□□□□□ -1.31
EPHB3P54753 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
EPHB3P54753 AP002371.1-201ENST00000463604 433 ntBASIC6.88□□□□□ -1.31
EPHB3P54753 AC021074.2-201ENST00000468434 172 ntBASIC6.88□□□□□ -1.31
EPHB3P54753 PFN1P8-201ENST00000497012 543 ntBASIC6.88□□□□□ -1.31
EPHB3P54753 AC091874.2-201ENST00000505889 720 ntBASIC6.88□□□□□ -1.31
EPHB3P54753 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC6.88□□□□□ -1.31
EPHB3P54753 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.88□□□□□ -1.31
EPHB3P54753 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.88□□□□□ -1.31
EPHB3P54753 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC6.88□□□□□ -1.31
EPHB3P54753 TOMM20P1-201ENST00000534518 427 ntBASIC6.88□□□□□ -1.31
EPHB3P54753 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.88□□□□□ -1.31
EPHB3P54753 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.88□□□□□ -1.31
EPHB3P54753 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC6.88□□□□□ -1.31
EPHB3P54753 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.88□□□□□ -1.31
EPHB3P54753 AC023161.2-201ENST00000551218 780 ntBASIC6.88□□□□□ -1.31
EPHB3P54753 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC6.88□□□□□ -1.31
EPHB3P54753 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC6.88□□□□□ -1.31
EPHB3P54753 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.88□□□□□ -1.31
EPHB3P54753 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
EPHB3P54753 UBA2-208ENST00000592791 910 ntTSL 2 BASIC6.88□□□□□ -1.31
EPHB3P54753 SMIM12P1-201ENST00000603004 274 ntBASIC6.88□□□□□ -1.31
EPHB3P54753 AL356986.1-201ENST00000604085 341 ntBASIC6.88□□□□□ -1.31
EPHB3P54753 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
EPHB3P54753 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.88□□□□□ -1.31
EPHB3P54753 SNORA11.6-201ENST00000619030 128 ntBASIC6.88□□□□□ -1.31
EPHB3P54753 AL354718.1-201ENST00000619764 589 ntBASIC6.88□□□□□ -1.31
EPHB3P54753 MIR6811-201ENST00000620409 58 ntBASIC6.88□□□□□ -1.31
EPHB3P54753 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.88□□□□□ -1.31
EPHB3P54753 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.88□□□□□ -1.31
EPHB3P54753 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.88□□□□□ -1.31
EPHB3P54753 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
EPHB3P54753 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
EPHB3P54753 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.88□□□□□ -1.31
EPHB3P54753 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.88□□□□□ -1.31
EPHB3P54753 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
EPHB3P54753 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
EPHB3P54753 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.87□□□□□ -1.31
EPHB3P54753 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
EPHB3P54753 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC6.87□□□□□ -1.31
EPHB3P54753 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC6.87□□□□□ -1.31
EPHB3P54753 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.87□□□□□ -1.31
EPHB3P54753 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
EPHB3P54753 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC6.87□□□□□ -1.31
EPHB3P54753 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
EPHB3P54753 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC6.87□□□□□ -1.31
EPHB3P54753 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
EPHB3P54753 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
EPHB3P54753 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.87□□□□□ -1.31
EPHB3P54753 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
EPHB3P54753 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.87□□□□□ -1.31
EPHB3P54753 AC234772.1-201ENST00000377927 937 ntBASIC6.87□□□□□ -1.31
EPHB3P54753 MIR188-201ENST00000385034 86 ntBASIC6.87□□□□□ -1.31
EPHB3P54753 YWHAZP6-201ENST00000399764 738 ntBASIC6.87□□□□□ -1.31
EPHB3P54753 RNA5SP198-201ENST00000410376 127 ntBASIC6.87□□□□□ -1.31
EPHB3P54753 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
EPHB3P54753 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC6.87□□□□□ -1.31
EPHB3P54753 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.87□□□□□ -1.31
EPHB3P54753 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.87□□□□□ -1.31
EPHB3P54753 EEF1B2P5-201ENST00000444820 548 ntBASIC6.87□□□□□ -1.31
EPHB3P54753 AL133217.1-201ENST00000450980 425 ntBASIC6.87□□□□□ -1.31
EPHB3P54753 AL390728.3-201ENST00000452704 270 ntBASIC6.87□□□□□ -1.31
EPHB3P54753 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.87□□□□□ -1.31
EPHB3P54753 MTCO2P18-201ENST00000457151 658 ntBASIC6.87□□□□□ -1.31
EPHB3P54753 RPL5P14-201ENST00000494197 878 ntBASIC6.87□□□□□ -1.31
EPHB3P54753 AC104685.1-201ENST00000502445 371 ntBASIC6.87□□□□□ -1.31
EPHB3P54753 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC6.87□□□□□ -1.31
EPHB3P54753 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC6.87□□□□□ -1.31
EPHB3P54753 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC6.87□□□□□ -1.31
EPHB3P54753 MGST2-204ENST00000506797 634 ntTSL 2 BASIC6.87□□□□□ -1.31
EPHB3P54753 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC6.87□□□□□ -1.31
EPHB3P54753 RNA5SP418-201ENST00000515951 117 ntBASIC6.87□□□□□ -1.31
EPHB3P54753 SNORA3.4-201ENST00000515969 96 ntBASIC6.87□□□□□ -1.31
EPHB3P54753 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC6.87□□□□□ -1.31
EPHB3P54753 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC6.87□□□□□ -1.31
EPHB3P54753 MTND4P33-201ENST00000556706 766 ntBASIC6.87□□□□□ -1.31
EPHB3P54753 AL845552.1-201ENST00000556820 323 ntBASIC6.87□□□□□ -1.31
EPHB3P54753 AC090888.3-201ENST00000558917 509 ntBASIC6.87□□□□□ -1.31
EPHB3P54753 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 158.8 ms