Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 RNU11-201ENST00000387069 134 ntBASIC6.51□□□□□ -1.37
COPB1P53618 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COPB1P53618 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COPB1P53618 THEM7P-201ENST00000419556 672 ntBASIC6.51□□□□□ -1.37
COPB1P53618 RPL7AP51-201ENST00000422016 760 ntBASIC6.51□□□□□ -1.37
COPB1P53618 KIF4CP-201ENST00000422742 1279 ntBASIC6.51□□□□□ -1.37
COPB1P53618 VN1R20P-201ENST00000425215 966 ntBASIC6.51□□□□□ -1.37
COPB1P53618 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COPB1P53618 RPS12P17-201ENST00000438591 377 ntBASIC6.51□□□□□ -1.37
COPB1P53618 RPL12P11-201ENST00000439970 501 ntBASIC6.51□□□□□ -1.37
COPB1P53618 SEPT14P12-201ENST00000442280 560 ntBASIC6.51□□□□□ -1.37
COPB1P53618 AC007383.1-201ENST00000445875 636 ntBASIC6.51□□□□□ -1.37
COPB1P53618 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
COPB1P53618 EEF1B2P3-201ENST00000447718 678 ntBASIC6.51□□□□□ -1.37
COPB1P53618 AC002553.3-201ENST00000453002 341 ntBASIC6.51□□□□□ -1.37
COPB1P53618 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.51□□□□□ -1.37
COPB1P53618 AC002075.1-201ENST00000457396 676 ntBASIC6.51□□□□□ -1.37
COPB1P53618 H3F3AP5-201ENST00000475267 429 ntBASIC6.51□□□□□ -1.37
COPB1P53618 AC079080.1-201ENST00000479841 822 ntBASIC6.51□□□□□ -1.37
COPB1P53618 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC6.51□□□□□ -1.37
COPB1P53618 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COPB1P53618 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.51□□□□□ -1.37
COPB1P53618 AC021733.2-201ENST00000518830 497 ntBASIC6.51□□□□□ -1.37
COPB1P53618 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.51□□□□□ -1.37
COPB1P53618 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC6.51□□□□□ -1.37
COPB1P53618 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.51□□□□□ -1.37
COPB1P53618 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.51□□□□□ -1.37
COPB1P53618 AC121758.1-202ENST00000556917 658 ntBASIC6.51□□□□□ -1.37
COPB1P53618 AC009268.1-201ENST00000561352 1203 ntBASIC6.51□□□□□ -1.37
COPB1P53618 RN7SL230P-201ENST00000580835 303 ntBASIC6.51□□□□□ -1.37
COPB1P53618 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC6.51□□□□□ -1.37
COPB1P53618 AL360012.1-201ENST00000602813 131 ntBASIC6.51□□□□□ -1.37
COPB1P53618 AL133481.2-203ENST00000607558 139 ntBASIC6.51□□□□□ -1.37
COPB1P53618 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.51□□□□□ -1.37
COPB1P53618 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.51□□□□□ -1.37
COPB1P53618 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.51□□□□□ -1.37
COPB1P53618 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
COPB1P53618 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COPB1P53618 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
COPB1P53618 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.51□□□□□ -1.37
COPB1P53618 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COPB1P53618 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.51□□□□□ -1.37
COPB1P53618 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COPB1P53618 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
COPB1P53618 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COPB1P53618 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
COPB1P53618 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COPB1P53618 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.51□□□□□ -1.37
COPB1P53618 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COPB1P53618 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.51□□□□□ -1.37
COPB1P53618 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COPB1P53618 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.51□□□□□ -1.37
COPB1P53618 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.5□□□□□ -1.37
COPB1P53618 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.5□□□□□ -1.37
COPB1P53618 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
COPB1P53618 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.5□□□□□ -1.37
COPB1P53618 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COPB1P53618 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COPB1P53618 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC6.5□□□□□ -1.37
COPB1P53618 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
COPB1P53618 AL133260.1-201ENST00000405720 405 ntBASIC6.5□□□□□ -1.37
COPB1P53618 METTL15P3-201ENST00000415522 1221 ntBASIC6.5□□□□□ -1.37
COPB1P53618 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.5□□□□□ -1.37
COPB1P53618 Z85994.2-201ENST00000434327 452 ntBASIC6.5□□□□□ -1.37
COPB1P53618 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
COPB1P53618 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
COPB1P53618 AL663074.2-201ENST00000440621 479 ntBASIC6.5□□□□□ -1.37
COPB1P53618 RPS15AP29-201ENST00000445539 400 ntBASIC6.5□□□□□ -1.37
COPB1P53618 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COPB1P53618 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COPB1P53618 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COPB1P53618 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC6.5□□□□□ -1.37
COPB1P53618 AC128716.1-201ENST00000475129 166 ntBASIC6.5□□□□□ -1.37
COPB1P53618 AC083795.1-201ENST00000491760 320 ntBASIC6.5□□□□□ -1.37
COPB1P53618 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.5□□□□□ -1.37
COPB1P53618 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COPB1P53618 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.5□□□□□ -1.37
COPB1P53618 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.5□□□□□ -1.37
COPB1P53618 MIR2117-201ENST00000516780 80 ntBASIC6.5□□□□□ -1.37
COPB1P53618 AC116917.1-201ENST00000520558 305 ntBASIC6.5□□□□□ -1.37
COPB1P53618 OR4R2P-201ENST00000530815 597 ntBASIC6.5□□□□□ -1.37
COPB1P53618 OR4A41P-201ENST00000533053 928 ntBASIC6.5□□□□□ -1.37
COPB1P53618 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.5□□□□□ -1.37
COPB1P53618 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.5□□□□□ -1.37
COPB1P53618 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC6.5□□□□□ -1.37
COPB1P53618 MIR3154-201ENST00000577829 84 ntBASIC6.5□□□□□ -1.37
COPB1P53618 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.5□□□□□ -1.37
COPB1P53618 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.5□□□□□ -1.37
COPB1P53618 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.5□□□□□ -1.37
COPB1P53618 AC008833.1-201ENST00000611633 691 ntBASIC6.5□□□□□ -1.37
COPB1P53618 TEX41-271ENST00000628213 993 ntTSL 5 BASIC6.5□□□□□ -1.37
COPB1P53618 AC004076.2-201ENST00000620532 3323 ntBASIC6.5□□□□□ -1.37
COPB1P53618 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COPB1P53618 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COPB1P53618 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COPB1P53618 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
COPB1P53618 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
COPB1P53618 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.5□□□□□ -1.37
COPB1P53618 WDR95P-201ENST00000425638 1542 ntBASIC6.5□□□□□ -1.37
COPB1P53618 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms