Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC7.61□□□□□ -1.19
USP11P51784 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC7.61□□□□□ -1.19
USP11P51784 AC092868.3-201ENST00000560515 784 ntBASIC7.61□□□□□ -1.19
USP11P51784 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC7.61□□□□□ -1.19
USP11P51784 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC7.61□□□□□ -1.19
USP11P51784 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC7.61□□□□□ -1.19
USP11P51784 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC7.61□□□□□ -1.19
USP11P51784 PLEKHA3P1-201ENST00000598554 894 ntBASIC7.61□□□□□ -1.19
USP11P51784 AL035411.2-201ENST00000604022 421 ntBASIC7.61□□□□□ -1.19
USP11P51784 AL135786.2-201ENST00000608422 615 ntBASIC7.61□□□□□ -1.19
USP11P51784 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
USP11P51784 Six3os1_4.1-201ENST00000615706 324 ntBASIC7.61□□□□□ -1.19
USP11P51784 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC7.61□□□□□ -1.19
USP11P51784 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC7.61□□□□□ -1.19
USP11P51784 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC7.61□□□□□ -1.19
USP11P51784 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
USP11P51784 CASC19-274ENST00000642018 970 ntBASIC7.61□□□□□ -1.19
USP11P51784 AC073544.1-201ENST00000600110 1595 ntBASIC7.61□□□□□ -1.19
USP11P51784 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
USP11P51784 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
USP11P51784 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
USP11P51784 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
USP11P51784 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
USP11P51784 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
USP11P51784 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
USP11P51784 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC7.6□□□□□ -1.19
USP11P51784 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC7.6□□□□□ -1.19
USP11P51784 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
USP11P51784 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.6□□□□□ -1.19
USP11P51784 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
USP11P51784 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
USP11P51784 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
USP11P51784 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
USP11P51784 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
USP11P51784 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
USP11P51784 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC7.6□□□□□ -1.19
USP11P51784 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
USP11P51784 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
USP11P51784 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
USP11P51784 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
USP11P51784 AL359694.1-201ENST00000403247 604 ntBASIC7.6□□□□□ -1.19
USP11P51784 TEX41-202ENST00000414256 604 ntTSL 5 BASIC7.6□□□□□ -1.19
USP11P51784 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC7.6□□□□□ -1.19
USP11P51784 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC7.6□□□□□ -1.19
USP11P51784 RNF19BPX-201ENST00000426224 625 ntBASIC7.6□□□□□ -1.19
USP11P51784 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
USP11P51784 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC7.6□□□□□ -1.19
USP11P51784 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC7.6□□□□□ -1.19
USP11P51784 BZW1P1-201ENST00000454901 1240 ntBASIC7.6□□□□□ -1.19
USP11P51784 AKR1D1P1-201ENST00000457236 936 ntBASIC7.6□□□□□ -1.19
USP11P51784 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC7.6□□□□□ -1.19
USP11P51784 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
USP11P51784 RN7SL37P-201ENST00000490461 307 ntBASIC7.6□□□□□ -1.19
USP11P51784 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC7.6□□□□□ -1.19
USP11P51784 LTV1P1-201ENST00000510683 1237 ntBASIC7.6□□□□□ -1.19
USP11P51784 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC7.6□□□□□ -1.19
USP11P51784 AC113191.1-201ENST00000517759 403 ntBASIC7.6□□□□□ -1.19
USP11P51784 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
USP11P51784 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC7.6□□□□□ -1.19
USP11P51784 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC7.6□□□□□ -1.19
USP11P51784 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC7.6□□□□□ -1.19
USP11P51784 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC7.6□□□□□ -1.19
USP11P51784 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC7.6□□□□□ -1.19
USP11P51784 AC245052.7-201ENST00000601161 359 ntBASIC7.6□□□□□ -1.19
USP11P51784 AL021707.7-201ENST00000607991 416 ntBASIC7.6□□□□□ -1.19
USP11P51784 AC025588.4-201ENST00000615802 908 ntBASIC7.6□□□□□ -1.19
USP11P51784 MIR7854-201ENST00000620068 65 ntBASIC7.6□□□□□ -1.19
USP11P51784 AL138693.1-201ENST00000622219 129 ntBASIC7.6□□□□□ -1.19
USP11P51784 AC022140.2-201ENST00000623500 188 ntBASIC7.6□□□□□ -1.19
USP11P51784 UGP2-231ENST00000627474 264 ntTSL 5 BASIC7.6□□□□□ -1.19
USP11P51784 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC7.6□□□□□ -1.19
USP11P51784 MIR1322-201ENST00000638013 71 ntBASIC7.6□□□□□ -1.19
USP11P51784 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC7.6□□□□□ -1.19
USP11P51784 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC7.6□□□□□ -1.19
USP11P51784 CLCA3P-203ENST00000490028 2781 ntBASIC7.6□□□□□ -1.19
USP11P51784 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
USP11P51784 TATDN2P3-201ENST00000452855 3665 ntBASIC7.6□□□□□ -1.19
USP11P51784 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
USP11P51784 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC7.6□□□□□ -1.19
USP11P51784 RBPJP6-201ENST00000411556 1431 ntBASIC7.6□□□□□ -1.19
USP11P51784 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
USP11P51784 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
USP11P51784 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
USP11P51784 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
USP11P51784 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
USP11P51784 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
USP11P51784 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC7.59□□□□□ -1.19
USP11P51784 SLC10A5P1-201ENST00000379063 1306 ntBASIC7.59□□□□□ -1.19
USP11P51784 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
USP11P51784 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC7.59□□□□□ -1.19
USP11P51784 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
USP11P51784 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
USP11P51784 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
USP11P51784 RNA5SP308-201ENST00000362532 115 ntBASIC7.59□□□□□ -1.19
USP11P51784 RNU5E-4P-201ENST00000364931 120 ntBASIC7.59□□□□□ -1.19
USP11P51784 RNU6-481P-201ENST00000384194 107 ntBASIC7.59□□□□□ -1.19
USP11P51784 AL021331.1-201ENST00000402817 582 ntBASIC7.59□□□□□ -1.19
USP11P51784 RN7SKP205-201ENST00000410999 307 ntBASIC7.59□□□□□ -1.19
USP11P51784 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
USP11P51784 AC011233.1-201ENST00000422812 283 ntBASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms