Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
GPC3P51654 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
GPC3P51654 AL731532.1-201ENST00000623972 4236 ntBASIC6.52□□□□□ -1.37
GPC3P51654 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
GPC3P51654 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.52□□□□□ -1.37
GPC3P51654 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
GPC3P51654 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
GPC3P51654 RNA5SP211-201ENST00000365516 117 ntBASIC6.52□□□□□ -1.37
GPC3P51654 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
GPC3P51654 RPS4XP5-201ENST00000419038 768 ntBASIC6.52□□□□□ -1.37
GPC3P51654 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.52□□□□□ -1.37
GPC3P51654 AC099677.3-201ENST00000427081 395 ntBASIC6.52□□□□□ -1.37
GPC3P51654 BX119321.1-201ENST00000428912 797 ntBASIC6.52□□□□□ -1.37
GPC3P51654 AC064862.4-201ENST00000442180 334 ntBASIC6.52□□□□□ -1.37
GPC3P51654 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.52□□□□□ -1.37
GPC3P51654 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.52□□□□□ -1.37
GPC3P51654 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.52□□□□□ -1.37
GPC3P51654 GAPDHP71-201ENST00000511530 1003 ntBASIC6.52□□□□□ -1.37
GPC3P51654 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.52□□□□□ -1.37
GPC3P51654 HMGN2P36-201ENST00000529541 409 ntBASIC6.52□□□□□ -1.37
GPC3P51654 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.52□□□□□ -1.37
GPC3P51654 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.52□□□□□ -1.37
GPC3P51654 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC6.52□□□□□ -1.37
GPC3P51654 RNA5SP440-201ENST00000612665 119 ntBASIC6.52□□□□□ -1.37
GPC3P51654 AC018628.1-201ENST00000624147 3819 ntBASIC6.52□□□□□ -1.37
GPC3P51654 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.52□□□□□ -1.37
GPC3P51654 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.52□□□□□ -1.37
GPC3P51654 ZNF101P1-201ENST00000435701 1720 ntBASIC6.52□□□□□ -1.37
GPC3P51654 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.52□□□□□ -1.37
GPC3P51654 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
GPC3P51654 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
GPC3P51654 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
GPC3P51654 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
GPC3P51654 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
GPC3P51654 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.51□□□□□ -1.37
GPC3P51654 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
GPC3P51654 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
GPC3P51654 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
GPC3P51654 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
GPC3P51654 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.51□□□□□ -1.37
GPC3P51654 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
GPC3P51654 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
GPC3P51654 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.51□□□□□ -1.37
GPC3P51654 METTL5-204ENST00000409340 472 ntTSL 5 BASIC6.51□□□□□ -1.37
GPC3P51654 MYL6P5-201ENST00000412707 459 ntBASIC6.51□□□□□ -1.37
GPC3P51654 RPS26P38-201ENST00000414476 348 ntBASIC6.51□□□□□ -1.37
GPC3P51654 RPL23AP18-201ENST00000416139 468 ntBASIC6.51□□□□□ -1.37
GPC3P51654 AC093155.2-201ENST00000420734 937 ntBASIC6.51□□□□□ -1.37
GPC3P51654 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.51□□□□□ -1.37
GPC3P51654 SETP9-201ENST00000423837 832 ntBASIC6.51□□□□□ -1.37
GPC3P51654 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.51□□□□□ -1.37
GPC3P51654 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.51□□□□□ -1.37
GPC3P51654 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.51□□□□□ -1.37
GPC3P51654 RPL12P16-201ENST00000431098 498 ntBASIC6.51□□□□□ -1.37
GPC3P51654 AL390879.1-201ENST00000439143 386 ntBASIC6.51□□□□□ -1.37
GPC3P51654 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.51□□□□□ -1.37
GPC3P51654 AC093166.4-201ENST00000457867 318 ntBASIC6.51□□□□□ -1.37
GPC3P51654 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
GPC3P51654 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
GPC3P51654 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
GPC3P51654 AC011411.1-201ENST00000509592 876 ntBASIC6.51□□□□□ -1.37
GPC3P51654 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.51□□□□□ -1.37
GPC3P51654 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.51□□□□□ -1.37
GPC3P51654 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.51□□□□□ -1.37
GPC3P51654 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.51□□□□□ -1.37
GPC3P51654 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.51□□□□□ -1.37
GPC3P51654 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.51□□□□□ -1.37
GPC3P51654 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.51□□□□□ -1.37
GPC3P51654 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.51□□□□□ -1.37
GPC3P51654 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.51□□□□□ -1.37
GPC3P51654 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.51□□□□□ -1.37
GPC3P51654 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
GPC3P51654 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
GPC3P51654 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
GPC3P51654 AC140479.2-201ENST00000421567 3130 ntBASIC6.51□□□□□ -1.37
GPC3P51654 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
GPC3P51654 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.51□□□□□ -1.37
GPC3P51654 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
GPC3P51654 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.51□□□□□ -1.37
GPC3P51654 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
GPC3P51654 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.5□□□□□ -1.37
GPC3P51654 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
GPC3P51654 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
GPC3P51654 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
GPC3P51654 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
GPC3P51654 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.5□□□□□ -1.37
GPC3P51654 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
GPC3P51654 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
GPC3P51654 MRPL53P1-201ENST00000414323 319 ntBASIC6.5□□□□□ -1.37
GPC3P51654 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.5□□□□□ -1.37
GPC3P51654 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.5□□□□□ -1.37
GPC3P51654 AL365220.1-201ENST00000432923 399 ntBASIC6.5□□□□□ -1.37
GPC3P51654 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.5□□□□□ -1.37
GPC3P51654 AP000281.1-201ENST00000444036 316 ntBASIC6.5□□□□□ -1.37
GPC3P51654 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.5□□□□□ -1.37
GPC3P51654 KATNBL1P4-201ENST00000503545 918 ntBASIC6.5□□□□□ -1.37
GPC3P51654 NENFP3-201ENST00000503735 313 ntBASIC6.5□□□□□ -1.37
GPC3P51654 GOLGA5P1-201ENST00000507317 980 ntBASIC6.5□□□□□ -1.37
GPC3P51654 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.5□□□□□ -1.37
GPC3P51654 AC112191.2-201ENST00000522428 333 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms