Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.92□□□□□ -1.46
FDFT1P37268 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.92□□□□□ -1.46
FDFT1P37268 CASC19-274ENST00000642018 970 ntBASIC5.92□□□□□ -1.46
FDFT1P37268 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
FDFT1P37268 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
FDFT1P37268 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
FDFT1P37268 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
FDFT1P37268 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
FDFT1P37268 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.91□□□□□ -1.46
FDFT1P37268 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.91□□□□□ -1.46
FDFT1P37268 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
FDFT1P37268 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
FDFT1P37268 RNU1-136P-201ENST00000384181 164 ntBASIC5.91□□□□□ -1.46
FDFT1P37268 AC087752.1-201ENST00000391360 558 ntBASIC5.91□□□□□ -1.46
FDFT1P37268 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.91□□□□□ -1.46
FDFT1P37268 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.91□□□□□ -1.46
FDFT1P37268 EIF5AP4-201ENST00000441206 465 ntBASIC5.91□□□□□ -1.46
FDFT1P37268 OR7E116P-201ENST00000448529 957 ntBASIC5.91□□□□□ -1.46
FDFT1P37268 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.91□□□□□ -1.46
FDFT1P37268 AC021006.1-201ENST00000489849 553 ntBASIC5.91□□□□□ -1.46
FDFT1P37268 GLUD1P3-202ENST00000508551 200 ntBASIC5.91□□□□□ -1.46
FDFT1P37268 SCARNA18.1-201ENST00000516330 83 ntBASIC5.91□□□□□ -1.46
FDFT1P37268 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.91□□□□□ -1.46
FDFT1P37268 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.91□□□□□ -1.46
FDFT1P37268 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
FDFT1P37268 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.91□□□□□ -1.46
FDFT1P37268 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.91□□□□□ -1.46
FDFT1P37268 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.91□□□□□ -1.46
FDFT1P37268 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.91□□□□□ -1.46
FDFT1P37268 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.91□□□□□ -1.46
FDFT1P37268 MIR4776-2-201ENST00000580204 80 ntBASIC5.91□□□□□ -1.46
FDFT1P37268 AL139041.1-201ENST00000605480 610 ntBASIC5.91□□□□□ -1.46
FDFT1P37268 CASC19-238ENST00000641523 1558 ntBASIC5.91□□□□□ -1.46
FDFT1P37268 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
FDFT1P37268 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
FDFT1P37268 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
FDFT1P37268 AC027088.4-201ENST00000611559 1947 ntBASIC5.91□□□□□ -1.46
FDFT1P37268 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
FDFT1P37268 MFSD8-219ENST00000641228 2559 ntBASIC5.91□□□□□ -1.46
FDFT1P37268 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
FDFT1P37268 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
FDFT1P37268 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
FDFT1P37268 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
FDFT1P37268 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.46
FDFT1P37268 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
FDFT1P37268 AL161912.4-201ENST00000623889 2468 ntBASIC5.9□□□□□ -1.46
FDFT1P37268 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.9□□□□□ -1.46
FDFT1P37268 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
FDFT1P37268 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.9□□□□□ -1.46
FDFT1P37268 AP000473.2-201ENST00000602659 1537 ntBASIC5.9□□□□□ -1.46
FDFT1P37268 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
FDFT1P37268 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
FDFT1P37268 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
FDFT1P37268 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
FDFT1P37268 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
FDFT1P37268 TRAV35-201ENST00000390462 330 ntBASIC5.9□□□□□ -1.46
FDFT1P37268 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.9□□□□□ -1.46
FDFT1P37268 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.9□□□□□ -1.46
FDFT1P37268 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
FDFT1P37268 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.9□□□□□ -1.46
FDFT1P37268 AC093166.3-201ENST00000448785 303 ntBASIC5.9□□□□□ -1.46
FDFT1P37268 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.9□□□□□ -1.46
FDFT1P37268 AC023194.2-201ENST00000465398 406 ntBASIC5.9□□□□□ -1.46
FDFT1P37268 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.9□□□□□ -1.46
FDFT1P37268 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.9□□□□□ -1.46
FDFT1P37268 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.9□□□□□ -1.46
FDFT1P37268 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
FDFT1P37268 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.9□□□□□ -1.46
FDFT1P37268 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.9□□□□□ -1.46
FDFT1P37268 HSD3BP3-201ENST00000514706 994 ntBASIC5.9□□□□□ -1.46
FDFT1P37268 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
FDFT1P37268 RN7SKP238-201ENST00000516483 249 ntBASIC5.9□□□□□ -1.46
FDFT1P37268 WBP1LP3-201ENST00000523033 208 ntBASIC5.9□□□□□ -1.46
FDFT1P37268 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.9□□□□□ -1.46
FDFT1P37268 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.9□□□□□ -1.46
FDFT1P37268 AC007956.1-201ENST00000555623 542 ntBASIC5.9□□□□□ -1.46
FDFT1P37268 MIR3154-201ENST00000577829 84 ntBASIC5.9□□□□□ -1.46
FDFT1P37268 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.9□□□□□ -1.46
FDFT1P37268 AP001437.1-201ENST00000608783 456 ntBASIC5.9□□□□□ -1.46
FDFT1P37268 AC108673.3-201ENST00000609183 335 ntBASIC5.9□□□□□ -1.46
FDFT1P37268 AC015712.7-201ENST00000615211 635 ntBASIC5.9□□□□□ -1.46
FDFT1P37268 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
FDFT1P37268 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
FDFT1P37268 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
FDFT1P37268 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.9□□□□□ -1.47
FDFT1P37268 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.9□□□□□ -1.47
FDFT1P37268 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
FDFT1P37268 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
FDFT1P37268 AC114774.1-201ENST00000507410 1770 ntBASIC5.9□□□□□ -1.47
FDFT1P37268 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
FDFT1P37268 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
FDFT1P37268 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
FDFT1P37268 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
FDFT1P37268 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
FDFT1P37268 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
FDFT1P37268 AC104966.1-201ENST00000467010 1464 ntBASIC5.9□□□□□ -1.47
FDFT1P37268 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
FDFT1P37268 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
FDFT1P37268 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
FDFT1P37268 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms