Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 RN7SKP78-201ENST00000364711 318 ntBASIC5.82□□□□□ -1.48
HMGCLP35914 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
HMGCLP35914 OR7E101P-201ENST00000400428 513 ntBASIC5.82□□□□□ -1.48
HMGCLP35914 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.82□□□□□ -1.48
HMGCLP35914 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.82□□□□□ -1.48
HMGCLP35914 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HMGCLP35914 MRPS21P2-201ENST00000424704 264 ntBASIC5.82□□□□□ -1.48
HMGCLP35914 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.82□□□□□ -1.48
HMGCLP35914 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HMGCLP35914 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.82□□□□□ -1.48
HMGCLP35914 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.82□□□□□ -1.48
HMGCLP35914 RPL5P10-201ENST00000445207 894 ntBASIC5.82□□□□□ -1.48
HMGCLP35914 FRG2FP-204ENST00000453982 852 ntBASIC5.82□□□□□ -1.48
HMGCLP35914 AC004129.2-201ENST00000457229 287 ntBASIC5.82□□□□□ -1.48
HMGCLP35914 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.82□□□□□ -1.48
HMGCLP35914 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.82□□□□□ -1.48
HMGCLP35914 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.82□□□□□ -1.48
HMGCLP35914 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.82□□□□□ -1.48
HMGCLP35914 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.82□□□□□ -1.48
HMGCLP35914 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.82□□□□□ -1.48
HMGCLP35914 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
HMGCLP35914 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.82□□□□□ -1.48
HMGCLP35914 NPM1P42-201ENST00000560329 862 ntBASIC5.82□□□□□ -1.48
HMGCLP35914 AC005726.4-201ENST00000582858 458 ntBASIC5.82□□□□□ -1.48
HMGCLP35914 MIR4260-201ENST00000583107 67 ntBASIC5.82□□□□□ -1.48
HMGCLP35914 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.82□□□□□ -1.48
HMGCLP35914 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.82□□□□□ -1.48
HMGCLP35914 MFSD8-219ENST00000641228 2559 ntBASIC5.82□□□□□ -1.48
HMGCLP35914 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HMGCLP35914 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.82□□□□□ -1.48
HMGCLP35914 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HMGCLP35914 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HMGCLP35914 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HMGCLP35914 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.82□□□□□ -1.48
HMGCLP35914 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HMGCLP35914 AL449283.1-201ENST00000602631 3403 ntBASIC5.81□□□□□ -1.48
HMGCLP35914 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HMGCLP35914 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.81□□□□□ -1.48
HMGCLP35914 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
HMGCLP35914 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.81□□□□□ -1.48
HMGCLP35914 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.81□□□□□ -1.48
HMGCLP35914 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.81□□□□□ -1.48
HMGCLP35914 MFSD8-239ENST00000641590 2479 ntBASIC5.81□□□□□ -1.48
HMGCLP35914 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HMGCLP35914 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HMGCLP35914 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
HMGCLP35914 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.81□□□□□ -1.48
HMGCLP35914 MRPL53P1-201ENST00000414323 319 ntBASIC5.81□□□□□ -1.48
HMGCLP35914 AK4P4-201ENST00000419465 646 ntBASIC5.81□□□□□ -1.48
HMGCLP35914 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.81□□□□□ -1.48
HMGCLP35914 AC092651.1-201ENST00000426110 312 ntBASIC5.81□□□□□ -1.48
HMGCLP35914 CRIP1P1-201ENST00000427567 185 ntBASIC5.81□□□□□ -1.48
HMGCLP35914 CDY8P-201ENST00000428380 1279 ntBASIC5.81□□□□□ -1.48
HMGCLP35914 AC126120.1-201ENST00000431082 470 ntBASIC5.81□□□□□ -1.48
HMGCLP35914 AL512637.1-201ENST00000439523 1231 ntBASIC5.81□□□□□ -1.48
HMGCLP35914 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.81□□□□□ -1.48
HMGCLP35914 CDY20P-201ENST00000447528 1279 ntBASIC5.81□□□□□ -1.48
HMGCLP35914 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.81□□□□□ -1.48
HMGCLP35914 AC093166.4-201ENST00000457867 318 ntBASIC5.81□□□□□ -1.48
HMGCLP35914 NDUFA5P5-201ENST00000468361 342 ntBASIC5.81□□□□□ -1.48
HMGCLP35914 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.81□□□□□ -1.48
HMGCLP35914 AC114781.3-201ENST00000512083 142 ntBASIC5.81□□□□□ -1.48
HMGCLP35914 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.81□□□□□ -1.48
HMGCLP35914 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.81□□□□□ -1.48
HMGCLP35914 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.81□□□□□ -1.48
HMGCLP35914 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.81□□□□□ -1.48
HMGCLP35914 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.81□□□□□ -1.48
HMGCLP35914 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.81□□□□□ -1.48
HMGCLP35914 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.81□□□□□ -1.48
HMGCLP35914 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.81□□□□□ -1.48
HMGCLP35914 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.81□□□□□ -1.48
HMGCLP35914 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.81□□□□□ -1.48
HMGCLP35914 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HMGCLP35914 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.81□□□□□ -1.48
HMGCLP35914 FAM27E4-201ENST00000605259 342 ntBASIC5.81□□□□□ -1.48
HMGCLP35914 AL365181.4-201ENST00000609800 547 ntBASIC5.81□□□□□ -1.48
HMGCLP35914 AL096712.1-201ENST00000614561 159 ntBASIC5.81□□□□□ -1.48
HMGCLP35914 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HMGCLP35914 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.81□□□□□ -1.48
HMGCLP35914 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HMGCLP35914 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.81□□□□□ -1.48
HMGCLP35914 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
HMGCLP35914 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HMGCLP35914 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.81□□□□□ -1.48
HMGCLP35914 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HMGCLP35914 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
HMGCLP35914 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HMGCLP35914 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
HMGCLP35914 AP004607.3-201ENST00000530354 3915 ntBASIC5.8□□□□□ -1.48
HMGCLP35914 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HMGCLP35914 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMGCLP35914 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMGCLP35914 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.8□□□□□ -1.48
HMGCLP35914 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
HMGCLP35914 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMGCLP35914 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMGCLP35914 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMGCLP35914 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.8□□□□□ -1.48
HMGCLP35914 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
HMGCLP35914 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms