Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
VARSP26640 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
VARSP26640 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
VARSP26640 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
VARSP26640 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
VARSP26640 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
VARSP26640 NF1P2-201ENST00000556855 2505 ntBASIC7.89□□□□□ -1.15
VARSP26640 PAH-201ENST00000307000 2466 ntTSL 5 BASIC7.89□□□□□ -1.15
VARSP26640 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
VARSP26640 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
VARSP26640 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
VARSP26640 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
VARSP26640 EEF1A1P28-201ENST00000450915 1403 ntBASIC7.88□□□□□ -1.15
VARSP26640 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC7.88□□□□□ -1.15
VARSP26640 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC7.88□□□□□ -1.15
VARSP26640 CDY2B-201ENST00000382867 1961 ntAPPRIS ALT1 BASIC7.88□□□□□ -1.15
VARSP26640 AL391262.1-201ENST00000556558 1992 ntBASIC7.88□□□□□ -1.15
VARSP26640 AC104964.2-201ENST00000562242 4641 ntBASIC7.88□□□□□ -1.15
VARSP26640 AC010894.3-201ENST00000442996 2400 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
VARSP26640 AL512604.2-201ENST00000426946 1314 ntTSL 5 BASIC7.88□□□□□ -1.15
VARSP26640 DYNC1I2P1-201ENST00000435916 1838 ntBASIC7.88□□□□□ -1.15
VARSP26640 GCSAM-201ENST00000308910 3336 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
VARSP26640 SMCO2-201ENST00000298876 1122 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
VARSP26640 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
VARSP26640 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
VARSP26640 CD44-205ENST00000352818 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
VARSP26640 Y_RNA.431-201ENST00000384086 102 ntBASIC7.88□□□□□ -1.15
VARSP26640 RPS3AP36-201ENST00000398190 775 ntBASIC7.88□□□□□ -1.15
VARSP26640 ERMN-204ENST00000409925 556 ntTSL 4 BASIC7.88□□□□□ -1.15
VARSP26640 SMCO2-202ENST00000416383 1272 ntAPPRIS P2 TSL 5 BASIC7.88□□□□□ -1.15
VARSP26640 SEPT7P5-201ENST00000434048 306 ntBASIC7.88□□□□□ -1.15
VARSP26640 YWHAQP9-201ENST00000445891 512 ntBASIC7.88□□□□□ -1.15
VARSP26640 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC7.88□□□□□ -1.15
VARSP26640 RPL4P2-201ENST00000447259 1282 ntBASIC7.88□□□□□ -1.15
VARSP26640 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC7.88□□□□□ -1.15
VARSP26640 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC7.88□□□□□ -1.15
VARSP26640 AC117395.3-201ENST00000471176 680 ntTSL 4 BASIC7.88□□□□□ -1.15
VARSP26640 AC091544.1-201ENST00000484702 348 ntBASIC7.88□□□□□ -1.15
VARSP26640 RPL22-208ENST00000497965 786 ntTSL 2 BASIC7.88□□□□□ -1.15
VARSP26640 AL031864.2-201ENST00000498507 350 ntBASIC7.88□□□□□ -1.15
VARSP26640 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC7.88□□□□□ -1.15
VARSP26640 SNORA18.6-201ENST00000516792 115 ntBASIC7.88□□□□□ -1.15
VARSP26640 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC7.88□□□□□ -1.15
VARSP26640 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC7.88□□□□□ -1.15
VARSP26640 EIF4A1P4-201ENST00000550578 1213 ntBASIC7.88□□□□□ -1.15
VARSP26640 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC7.88□□□□□ -1.15
VARSP26640 AL132855.1-201ENST00000557368 207 ntTSL 3 BASIC7.88□□□□□ -1.15
VARSP26640 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC7.88□□□□□ -1.15
VARSP26640 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC7.88□□□□□ -1.15
VARSP26640 AC133485.3-201ENST00000562604 262 ntTSL 5 BASIC7.88□□□□□ -1.15
VARSP26640 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC7.88□□□□□ -1.15
VARSP26640 AC138907.3-201ENST00000563937 262 ntTSL 3 BASIC7.88□□□□□ -1.15
VARSP26640 AC092287.1-201ENST00000565782 463 ntTSL 3 BASIC7.88□□□□□ -1.15
VARSP26640 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC7.88□□□□□ -1.15
VARSP26640 AC138869.2-201ENST00000569850 262 ntTSL 3 BASIC7.88□□□□□ -1.15
VARSP26640 RN7SL311P-201ENST00000579858 306 ntBASIC7.88□□□□□ -1.15
VARSP26640 AP001004.1-201ENST00000582468 324 ntBASIC7.88□□□□□ -1.15
VARSP26640 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC7.88□□□□□ -1.15
VARSP26640 LINC01483-205ENST00000591334 620 ntTSL 4 BASIC7.88□□□□□ -1.15
VARSP26640 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC7.88□□□□□ -1.15
VARSP26640 ZNF83-210ENST00000597161 509 ntTSL 4 BASIC7.88□□□□□ -1.15
VARSP26640 MTCO2P22-201ENST00000603246 681 ntBASIC7.88□□□□□ -1.15
VARSP26640 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC7.88□□□□□ -1.15
VARSP26640 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC7.88□□□□□ -1.15
VARSP26640 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
VARSP26640 AL713922.2-201ENST00000619384 716 ntBASIC7.88□□□□□ -1.15
VARSP26640 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
VARSP26640 LINC01002-216ENST00000632351 572 ntTSL 5 BASIC7.88□□□□□ -1.15
VARSP26640 AC005841.2-201ENST00000637658 1167 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
VARSP26640 MAGT1-205ENST00000618282 2788 ntAPPRIS ALT1 TSL 1 (best) BASIC7.88□□□□□ -1.15
VARSP26640 TM2D2-203ENST00000456845 3295 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
VARSP26640 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC7.88□□□□□ -1.15
VARSP26640 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC7.88□□□□□ -1.15
VARSP26640 CPB2-AS1-204ENST00000606991 3218 ntTSL 2 BASIC7.88□□□□□ -1.15
VARSP26640 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
VARSP26640 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
VARSP26640 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
VARSP26640 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC7.88□□□□□ -1.15
VARSP26640 FOXM1-201ENST00000342628 3475 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
VARSP26640 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
VARSP26640 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
VARSP26640 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC7.88□□□□□ -1.15
VARSP26640 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
VARSP26640 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
VARSP26640 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
VARSP26640 DNAJC5B-201ENST00000276570 1382 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
VARSP26640 C1D-202ENST00000407324 1379 ntTSL 3 BASIC7.87□□□□□ -1.15
VARSP26640 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
VARSP26640 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
VARSP26640 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC7.87□□□□□ -1.15
VARSP26640 AC139426.3-201ENST00000605648 2059 ntBASIC7.87□□□□□ -1.15
VARSP26640 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
VARSP26640 CTAGE3P-201ENST00000454280 2404 ntBASIC7.87□□□□□ -1.15
VARSP26640 GJA10-201ENST00000369352 1652 ntAPPRIS P2 BASIC7.87□□□□□ -1.15
VARSP26640 TARS2P1-201ENST00000506124 2041 ntBASIC7.87□□□□□ -1.15
VARSP26640 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC7.87□□□□□ -1.15
VARSP26640 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
VARSP26640 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
VARSP26640 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
VARSP26640 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms