Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 HMGN2P36-201ENST00000529541 409 ntBASIC4.94□□□□□ -1.62
CCL1P22362 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCL1P22362 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC4.94□□□□□ -1.62
CCL1P22362 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC4.94□□□□□ -1.62
CCL1P22362 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC4.94□□□□□ -1.62
CCL1P22362 MIR4502-201ENST00000580432 81 ntBASIC4.94□□□□□ -1.62
CCL1P22362 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC4.94□□□□□ -1.62
CCL1P22362 AC008507.3-201ENST00000585753 472 ntBASIC4.94□□□□□ -1.62
CCL1P22362 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC4.94□□□□□ -1.62
CCL1P22362 AC022919.1-201ENST00000624979 626 ntBASIC4.94□□□□□ -1.62
CCL1P22362 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC4.94□□□□□ -1.62
CCL1P22362 TEX41-293ENST00000630451 690 ntTSL 5 BASIC4.94□□□□□ -1.62
CCL1P22362 CASC19-274ENST00000642018 970 ntBASIC4.94□□□□□ -1.62
CCL1P22362 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC4.94□□□□□ -1.62
CCL1P22362 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC4.94□□□□□ -1.62
CCL1P22362 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC4.94□□□□□ -1.62
CCL1P22362 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC4.94□□□□□ -1.62
CCL1P22362 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCL1P22362 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCL1P22362 EEF1A1P30-201ENST00000429708 1315 ntBASIC4.94□□□□□ -1.62
CCL1P22362 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.94□□□□□ -1.62
CCL1P22362 AC016745.2-201ENST00000608834 3443 ntBASIC4.94□□□□□ -1.62
CCL1P22362 AC104966.1-201ENST00000467010 1464 ntBASIC4.94□□□□□ -1.62
CCL1P22362 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCL1P22362 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
CCL1P22362 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC4.93□□□□□ -1.62
CCL1P22362 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCL1P22362 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCL1P22362 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.93□□□□□ -1.62
CCL1P22362 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCL1P22362 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
CCL1P22362 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC4.93□□□□□ -1.62
CCL1P22362 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.93□□□□□ -1.62
CCL1P22362 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCL1P22362 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCL1P22362 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCL1P22362 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCL1P22362 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCL1P22362 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CCL1P22362 AC096921.1-201ENST00000411661 375 ntBASIC4.93□□□□□ -1.62
CCL1P22362 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.93□□□□□ -1.62
CCL1P22362 TRGV5P-201ENST00000419915 354 ntBASIC4.93□□□□□ -1.62
CCL1P22362 AC009506.2-201ENST00000420635 840 ntBASIC4.93□□□□□ -1.62
CCL1P22362 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.93□□□□□ -1.62
CCL1P22362 TMEM183AP1-205ENST00000432739 290 ntBASIC4.93□□□□□ -1.62
CCL1P22362 PCBP2P1-201ENST00000437262 977 ntBASIC4.93□□□□□ -1.62
CCL1P22362 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.93□□□□□ -1.62
CCL1P22362 ATP5LP2-201ENST00000440646 311 ntBASIC4.93□□□□□ -1.62
CCL1P22362 TIMM8BP2-201ENST00000445940 251 ntBASIC4.93□□□□□ -1.62
CCL1P22362 AC002075.1-201ENST00000457396 676 ntBASIC4.93□□□□□ -1.62
CCL1P22362 CST12P-201ENST00000457644 362 ntBASIC4.93□□□□□ -1.62
CCL1P22362 RBBP4P1-201ENST00000502424 1276 ntBASIC4.93□□□□□ -1.62
CCL1P22362 LSM3P4-201ENST00000502948 309 ntBASIC4.93□□□□□ -1.62
CCL1P22362 LDHAP1-201ENST00000509421 992 ntBASIC4.93□□□□□ -1.62
CCL1P22362 RNA5SP340-201ENST00000517132 107 ntBASIC4.93□□□□□ -1.62
CCL1P22362 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC4.93□□□□□ -1.62
CCL1P22362 PCNAP4-201ENST00000532690 730 ntBASIC4.93□□□□□ -1.62
CCL1P22362 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC4.93□□□□□ -1.62
CCL1P22362 AC122688.1-201ENST00000541494 223 ntBASIC4.93□□□□□ -1.62
CCL1P22362 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC4.93□□□□□ -1.62
CCL1P22362 MED21-206ENST00000546323 575 ntTSL 3 BASIC4.93□□□□□ -1.62
CCL1P22362 MYL6-213ENST00000549017 502 ntTSL 3 BASIC4.93□□□□□ -1.62
CCL1P22362 AGGF1P7-201ENST00000562369 913 ntBASIC4.93□□□□□ -1.62
CCL1P22362 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC4.93□□□□□ -1.62
CCL1P22362 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC4.93□□□□□ -1.62
CCL1P22362 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCL1P22362 AL139124.1-201ENST00000609123 421 ntBASIC4.93□□□□□ -1.62
CCL1P22362 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC4.93□□□□□ -1.62
CCL1P22362 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC4.93□□□□□ -1.62
CCL1P22362 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC4.93□□□□□ -1.62
CCL1P22362 MIR6813-201ENST00000621638 56 ntBASIC4.93□□□□□ -1.62
CCL1P22362 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCL1P22362 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC4.93□□□□□ -1.62
CCL1P22362 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCL1P22362 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCL1P22362 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CCL1P22362 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC4.93□□□□□ -1.62
CCL1P22362 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
CCL1P22362 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CCL1P22362 AC007938.2-201ENST00000604666 2634 ntBASIC4.93□□□□□ -1.62
CCL1P22362 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCL1P22362 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCL1P22362 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
CCL1P22362 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC4.92□□□□□ -1.62
CCL1P22362 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCL1P22362 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCL1P22362 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC4.92□□□□□ -1.62
CCL1P22362 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
CCL1P22362 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCL1P22362 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.92□□□□□ -1.62
CCL1P22362 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCL1P22362 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCL1P22362 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC4.92□□□□□ -1.62
CCL1P22362 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.92□□□□□ -1.62
CCL1P22362 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CCL1P22362 RNA5SP326-201ENST00000363209 110 ntBASIC4.92□□□□□ -1.62
CCL1P22362 NPM1P38-201ENST00000403835 865 ntBASIC4.92□□□□□ -1.62
CCL1P22362 MRPL53P1-201ENST00000414323 319 ntBASIC4.92□□□□□ -1.62
CCL1P22362 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC4.92□□□□□ -1.62
CCL1P22362 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms